Breaking proteins with mutations: threads and thresholds in evolution
| Autor: | Claus O. Wilke, Jesse D. Bloom, Frances H. Arnold |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2007 |
| Předmět: |
Genetics
business.product_category General Immunology and Microbiology Applied Mathematics technology industry and agriculture Anchoring A protein Thread (computing) Biology General Biochemistry Genetics and Molecular Biology Combinatorics body regions Computational Theory and Mathematics Rubber band Epistasis General Agricultural and Biological Sciences business Random mutation News and Views Information Systems |
| Zdroj: | Molecular Systems Biology |
| ISSN: | 1744-4292 |
| Popis: | Mol Syst Biol. 3: 76 A common high school science experiment involves anchoring one end of a rubber band to a desk and then attaching a small weight to the other end. The weight stretches the rubber band, and adding another weight causes the rubber band to dangle even lower. More weights can be added, and each one pulls the rubber band a little further towards the floor. Now, instead imagine attaching the weights to a thread. The thread stretches only slightly; so the first couple of weights have just a small effect. But if you add enough weights, the thread suddenly breaks and the weights fall to the floor. In the first case, each additional weight stretches the rubber band by the same amount, whereas in the second, it is the combination of several weights that breaks the thread. Mutating proteins is like adding weights, as mutations eventually ‘break’ the individual proteins, dragging down the fraction of proteins that still function (this fraction is the average fitness). The question becomes, does each mutation decrease the average fitness by the same amount (like weights on a rubber band), or are several mutations worse than their combined individual effects (like weights on a thread)? The latter situation is called ‘negative epistasis,’ and measuring the extent of epistasis is important for understanding evolution. If mutating a protein is like stretching a rubber band, then there is no epistasis and each random mutation has the same probability ν of leaving a protein's function intact. So the average fitness W (1) after each protein is mutated once is ν , as this is the fraction of proteins that are … |
| Databáze: | OpenAIRE |
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