Gold nanocrystal-mediated sliding of doublet DNA origami filaments

Autor: Maximilian J. Urban, Chao Zhou, Thomas Weiss, Klas Lindfors, Anton Kuzyk, Steffen Both, Na Liu
Přispěvatelé: Max Planck Institute for Intelligent Systems, University of Stuttgart, Department of Neuroscience and Biomedical Engineering, University of Cologne, Aalto-yliopisto, Aalto University
Rok vydání: 2021
Předmět:
Materials science
Surface Properties
Science
General Physics and Astronomy
Kinesins
Metal Nanoparticles
FOS: Physical sciences
02 engineering and technology
macromolecular substances
010402 general chemistry
Antiparallel (biochemistry)
01 natural sciences
Microtubules
General Biochemistry
Genetics and Molecular Biology

Fluorescence spectroscopy
Article
chemistry.chemical_compound
Microscopy
Electron
Transmission

Microtubule
Fluorescence Resonance Energy Transfer
DNA origami
Physics - Biological Physics
lcsh:Science
Nanoscopic scale
Multidisciplinary
General Chemistry
DNA
021001 nanoscience & nanotechnology
0104 chemical sciences
Cross-Linking Reagents
Nanocrystal
chemistry
Biological Physics (physics.bio-ph)
Biophysics
Nanoparticles
Nucleic Acid Conformation
lcsh:Q
Gold
Elongation
0210 nano-technology
Physics - Optics
Optics (physics.optics)
Zdroj: Nature Communications, Vol 9, Iss 1, Pp 1-7 (2018)
Nature Communications
DOI: 10.48550/arxiv.2105.00804
Popis: Sliding is one of the fundamental mechanical movements in machinery. In macroscopic systems, double-rack pinion machines employ gears to slide two linear tracks along opposite directions. In microscopic systems, kinesin-5 proteins crosslink and slide apart antiparallel microtubules, promoting spindle bipolarity and elongation during mitosis. Here we demonstrate an artificial nanoscopic analog, in which gold nanocrystals can mediate coordinated sliding of two antiparallel DNA origami filaments powered by DNA fuels. Stepwise and reversible sliding along opposite directions is in situ monitored and confirmed using fluorescence spectroscopy. A theoretical model including different energy transfer mechanisms is developed to understand the observed fluorescence dynamics. We further show that such sliding can also take place in the presence of multiple DNA sidelocks that are introduced to inhibit the relative movements. Our work enriches the toolbox of DNA-based nanomachinery, taking one step further toward the vision of molecular nanofactories.
Kinesin, a motor protein, moves along filaments in a walk-like fashion to transport cargo to specific places in the cell. Here, the authors developed an analogous, artificial system consisting of nanoparticles moving along DNA filaments.
Databáze: OpenAIRE