Datasets for genome assembly of six underutilized Indonesian fruits
| Autor: | Eiichi Inoue, Ulfah J. Siregar, Roedhy Poerwanto, Azis Natawijaya, Winarso Drajad Widodo, Arya Widura Ritonga, Deden Derajat Matra, Sobir |
|---|---|
| Rok vydání: | 2019 |
| Předmět: |
0303 health sciences
Multidisciplinary biology Flacourtia inermis lcsh:Computer applications to medicine. Medical informatics biology.organism_classification 03 medical and health sciences Artocarpus 0302 clinical medicine Agricultural and Biological Science Artocarpus integer Syzygium Botany lcsh:R858-859.7 Pometia pinnata Lansium lcsh:Science (General) Genome size 030217 neurology & neurosurgery Salacca lcsh:Q1-390 030304 developmental biology |
| Zdroj: | Data in Brief Data in Brief, Vol 22, Iss, Pp 960-963 (2019) |
| ISSN: | 2352-3409 |
| DOI: | 10.1016/j.dib.2018.12.070 |
| Popis: | Indonesia has a high genetic diversity of tropical fruits. However, studies on genomics are still very limited. In this data article, six underutilized Indonesian fruits were analyzed for the estimated genome size and partial data of genome assembly including Artocarpus nangkadak (Artocarpus heterophyllus x Artocarpus integer), Salacca sumatrana, Flacourtia inermis, Lansium domesticum, Pometia pinnata, and Syzygium samarangense. These genome data may be used to construct molecular markers for plant systematics and breeding program of these species. Our genome data were sequenced paired-end libraries using BGISeq-500 and generated approximately 5 Gb of bases per species. The raw sequences have been deposited in the DNA Data Bank of Japan (DDBJ) under the DDBJ BioProject umbrella with accession number PRJDB7265 and to the DDBJ Read Archive for each species following Artocarpus nangkadak (DRA007398), Salacca sumatrana (DRA007394), Flacourtia inermis (DRA007395), Lansium domesticum (DRA007393), Pometia pinnata (DRA007396), Syzygium samarangense (DRA007397). |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|