TBP, PPIA, YWHAZ and EF1A1 are the most stably expressed genes during osteogenic differentiation
| Autor: | Nina Franko, Lucija Ana Vrščaj, Taja Zore, Barbara Ostanek, Janja Marc, Jasna Lojk |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2022 |
| Předmět: |
referenčni gen
BestKeeper reference gene osteogenic differentiation geNorm Catalysis celična linija osteosarkoma gensko izražanje Inorganic Chemistry udc:575 osteosarcoma cell line Physical and Theoretical Chemistry Molecular Biology Spectroscopy Gensko izražanje osteosarkom Organic Chemistry RT-qPCR geNorm reference gene NormFinder BestKeeper osteogenic differentiation gene expression osteosarcoma cell line RT-qPCR NormFinder gene expression General Medicine osteogena diferenciacija Osteosarkom Computer Science Applications udc:575.117:616-006.34 referenčni gen osteogena diferenciacija izražanje genov celična linija osteosarkoma |
| Zdroj: | International journal of molecular sciences, str. 1-17 : ilustr., Vol. 23, no. 8, 2022 COBISS-ID: 2779162 International journal of molecular sciences, vol. 23, no. 8, 4257, 2022. International Journal of Molecular Sciences; Volume 23; Issue 8; Pages: 4257 |
| ISSN: | 1422-0067 |
| Popis: | RT-qPCR is the gold standard and the most commonly used method for measuring gene expression. Selection of appropriate reference gene(s) for normalization is a crucial part of RT-qPCR experimental design, which allows accurate quantification and reliability of the results. Because there is no universal reference gene and even commonly used housekeeping genes’ expression can vary under certain conditions, careful selection of an appropriate internal control must be performed for each cell type or tissue and experimental design. The aim of this study was to identify the most stable reference genes during osteogenic differentiation of the human osteosarcoma cell lines MG-63, HOS, and SaOS-2 using the geNorm, NormFinder, and BestKeeper statistical algorithms. Our results show that TBP, PPIA, YWHAZ, and EF1A1 are the most stably expressed genes, while ACTB, and 18S rRNA expressions are most variable. These data provide a basis for future RT-qPCR normalizations when studying gene expression during osteogenic differentiation, for example, in studies of osteoporosis and other bone diseases. Nasl. z nasl. zaslona. Opis vira z dne 19. 04. 2022. Št. članka: 4257. Abstract. Bibliografija: str. 16-17. |
| Databáze: | OpenAIRE |
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