Additional file 2 of Clinical evaluation of Bladder CARE, a new epigenetic test for bladder cancer detection in urine samples

Autor: Piatti, Paolo, Yap Ching Chew, Suwoto, Michiko, Taikun Yamada, Jara, Benjamin, Jia, Xi-Yu, Guo, Wei, Saum Ghodoussipour, Siamak Daneshmand, Ahmadi, Hamed, Rice, Jeffrey, Bhasin, Jeffrey, Holloway, Faith, Tsai, Yvonne, Yoshitomo Chihara, Liang, Gangning
Rok vydání: 2021
DOI: 10.6084/m9.figshare.14462485.v1
Popis: Additional file 2: Table S1. For each sample the percentage of methylation was calculated by applying the formula 2^-ΔCT * 100, where ΔCT was calculated by subtracting the CT value of the HpaII restriction digestion reaction (HpaII RD) from the CT value of the no restriction digestion reaction (No RD). The test was performed in two technical replicates. Table S2. Abbreviations: Rep, replicate; SD, standard deviation; SE, standard error; n.a., not applicable; LD583, cancer cell line [41]. *, number of cells (LD583 cancer cell line) are calculated considering that one DNA molecule weights 3.59 pg [43]. Table S3. Abbreviations: TCC, transitional cell carcinoma; n.a., not available. False negative cases are highlighted in grey. Blood and leukocytes contents was measured with Multistix 10SG Urinalysis Test Strips (Siemens), and results are reported based on manufacturer classification.
Databáze: OpenAIRE