Evolutionary genomics of epidemic visceral leishmaniasis in the Indian subcontinent

Autor: Gabriele Schönian, Harry P. de Koning, Saskia Decuypere, Keshav Rai, Mandy Sanders, Shyam Sundar, Basudha Khanal, Jean-Claude Dujardin, Bart Cuypers, Géraldine De Muylder, An Mannaert, Smriti Sharma, Benoit Vanhollebeke, Bart Ostyn, Hideo Imamura, Ilse Maes, Maya Berg, Frederik Van den Broeck, Marleen Boelaert, Manu Vanaerschot, Narayan Raj Bhattarai, Syamal Roy, Vijay Kumar Prajapati, Suman Rijal, Olivia Stark, Malgorzata A. Domagalska, Surendra Uranw, James Cotton, Luca Settimo, Franck Dumetz, Matthew Berriman, Tim Downing, Louis Maes
Přispěvatelé: Clinical sciences, Medical Genetics, Faculty of Sciences and Bioengineering Sciences, Biology, Faculty of Law and Criminology
Jazyk: angličtina
Rok vydání: 2016
Předmět:
0301 basic medicine
Antimony
population-structure
Drug Resistance
deleterious mutations
Drug resistance
resistant plasmodium-falciparum
drug-resistance
leishmania donovani
Immunologie
Biology (General)
Recombination
Genetic

education.field_of_study
Molecular Epidemiology
Microbiology and Infectious Disease
DNA-sequencing data
General Neuroscience
General Medicine
Sciences bio-médicales et agricoles
kala-azar
3. Good health
variation discovery
Parasitic disease
Medicine
Leishmaniasis
Visceral

Research Article
QH301-705.5
Science
Population
Leishmania donovani
Antiprotozoal Agents
India
Biology
donovani complex
General Biochemistry
Genetics and Molecular Biology

Evolution
Molecular

03 medical and health sciences
Nepal
evolution
parasitic diseases
medicine
genomics
Humans
education
Epidemics
General Immunology and Microbiology
Aquaporin 1
business.industry
Neurosciences cognitives
Genetic Variation
Leishmaniasis
Sequence Analysis
DNA

medicine.disease
biology.organism_classification
Virology
Biotechnology
030104 developmental biology
Visceral leishmaniasis
Epidemiology and Global Health
Infectious disease (medical specialty)
aquaglyceroporin
Antimonial
Human medicine
Other
business
Microbiologie et protistologie [bacteriol.virolog.mycolog.]
Genome
Protozoan
Zdroj: eLife
eLife, Vol 5 (2016)
eLife, 5 (MARCH2016
ISSN: 2050-084X
Popis: Leishmania donovani causes visceral leishmaniasis (VL), the second most deadly vector- borne parasitic disease. A recent epidemic in the Indian subcontinent (ISC) caused up to 80% of global VL and over 30,000 deaths per year. Resistance against antimonial drugs has probably been a contributing factor in the persistence of this epidemic. Here we use whole genome sequences from 204 clinical isolates to track the evolution and epidemiology of L. donovani from the ISC. We identify independent radiations that have emerged since a bottleneck coincident with 1960s DDT spraying campaigns. A genetically distinct population frequently resistant to antimonials has a two base-pair insertion in the aquaglyceroporin gene LdAQP1 that prevents the transport of trivalent antimonials. We find evidence of genetic exchange between ISC populations, and show that the mutation in LdAQP1 has spread by recombination. Our results reveal the complexity of L. donovani evolution in the ISC in response to drug treatment.
SCOPUS: ar.j
info:eu-repo/semantics/published
Databáze: OpenAIRE