SimNIBS 2.1: A Comprehensive Pipeline for Individualized Electric Field Modelling for Transcranial Brain Stimulation
| Autor: | Kristoffer Hougaard Madsen, Daria Antonenko, Oula Puonti, Jesper Duemose Nielsen, Axel Thielscher, Guilherme B. Saturnino |
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| Jazyk: | angličtina |
| Rok vydání: | 2019 |
| Předmět: |
03 medical and health sciences
0302 clinical medicine Computer simulation Computer science Robustness (computer science) Human–computer interaction Brain stimulation 05 social sciences 0501 psychology and cognitive sciences Set (psychology) Pipeline (software) 030217 neurology & neurosurgery 050105 experimental psychology |
| Zdroj: | Saturnino, G B, Puonti, O, Nielsen, J D, Antonenko, D, Madsen, K H & Thielscher, A 2019, SimNIBS 2.1: A Comprehensive Pipeline for Individualized Electric Field Modelling for Transcranial Brain Stimulation . in Brain and Human Body Modeling . Springer, pp. 3-25 . https://doi.org/10.1007/978-3-030-21293-3_1 Brain and Human Body Modeling Brain and Human Body Modeling ISBN: 9783030212926 Brain and Human Body Modeling-Computational Human Modeling at EMBC 2018 |
| DOI: | 10.1007/978-3-030-21293-3_1 |
| Popis: | Numerical simulation of the electric fields induced by non-invasive brain stimulation (NIBS), using realistic anatomical head models has gained interest in recent years for understanding the NIBS effects in individual subjects. Although automated tools for generating the head models and performing the electric field simulations have become available, individualized modelling is still not a standard practice in NIBS studies. This is likely partly explained by the lack of robustness and usability of the previously available software tools, and partly by the still developing understanding of the link between physiological effects and electric field distributions in the brain. To facilitate individualized modelling in NIBS, we have introduced the SimNIBS (Simulation of NIBS) software package, providing easy-to-use automated tools for electric field modelling. In this chapter, we give an overview of the modelling pipeline in SimNIBS 2.1, with step-by-step examples of how to run a simulation. Furthermore, we demonstrate a set of scripts for extracting average electric fields for a group of subjects, and finally demonstrate the accuracy of automated placement of standard electrode montages on the head model. SimNIBS 2.1 is freely available at www.simnibs.org . |
| Databáze: | OpenAIRE |
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