Simulation and Machine Learning Methods for Ion-Channel Structure Determination, Mechanistic Studies and Drug Design

Autor: Zhu, Zhengdan, Deng, Zhenfeng, Wang, Qinrui, Wang, Yuhang, Zhang, Duo, Xu, Ruihan, Guo, Lvjun, Wen, Han
Rok vydání: 2022
Předmět:
Zdroj: Frontiers in Pharmacology. 13
ISSN: 1663-9812
DOI: 10.3389/fphar.2022.939555
Popis: Ion channels are expressed in almost all living cells, controlling the in-and-out communications, making them ideal drug targets, especially for central nervous system diseases. However, owing to their dynamic nature and the presence of a membrane environment, ion channels remain difficult targets for the past decades. Recent advancement in cryo-electron microscopy and computational methods has shed light on this issue. An explosion in high-resolution ion channel structures paved way for structure-based rational drug design and the state-of-the-art simulation and machine learning techniques dramatically improved the efficiency and effectiveness of computer-aided drug design. Here we present an overview of how simulation and machine learning-based methods fundamentally changed the ion channel-related drug design at different levels, as well as the emerging trends in the field.
Databáze: OpenAIRE