Porphyrin Binding and Irradiation Promote G-Quadruplex DNA Dimeric Structure

Autor: Aurelien Thureau, M. Longo, Anne Martel, Alessandro Paciaroni, Caterina Petrillo, Valeria Libera, Giorgio Schirò, Lucia Comez, Elena A. Andreeva
Přispěvatelé: Dipartimento di Fisica e Geologia [Perugia], Università degli Studi di Perugia (UNIPG), Institut de biologie structurale (IBS - UMR 5075), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes (UGA), European Synchrotron Radiation Facility (ESRF), Synchrotron SOLEIL (SSOLEIL), Centre National de la Recherche Scientifique (CNRS), Jülich Centre for Neutron Science (JCNS), Forschungszentrum Jülich GmbH at Heinz Maier-Leibnitz Zentrum (MLZ), Università degli Studi di Perugia = University of Perugia (UNIPG)
Jazyk: angličtina
Rok vydání: 2021
Předmět:
Porphyrins
Dimer
MESH: Molecular Structure
010402 general chemistry
G-quadruplex
SEQUENCE
01 natural sciences
MESH: Circular Dichroism
Scattering
03 medical and health sciences
chemistry.chemical_compound
MESH: X-Rays
ABSORPTION
Scattering
Radiation

General Materials Science
Physical and Theoretical Chemistry
MESH: Scattering
Radiation

Protein secondary structure
030304 developmental biology
0303 health sciences
MESH: Porphyrins
Radiation
Molecular Structure
[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry
Molecular Biology/Structural Biology [q-bio.BM]

Circular Dichroism
X-Rays
MESH: DNA
CATIONIC PORPHYRINS
DNA
Telomere
Porphyrin
Small molecule
0104 chemical sciences
G-Quadruplexes
chemistry
MESH: Dimerization
Nucleic acid
Biophysics
Protein quaternary structure
LIGAND
MESH: Telomere
TELOMERE G-QUADRUPLEX
Dimerization
TMPYP4
MESH: G-Quadruplexes
Zdroj: Journal of Physical Chemistry Letters
Journal of Physical Chemistry Letters, American Chemical Society, 2021, 12 (33), pp.8096-8102. ⟨10.1021/acs.jpclett.1c01840⟩
Journal of Physical Chemistry Letters, 2021, 12 (33), pp.8096-8102. ⟨10.1021/acs.jpclett.1c01840⟩
Libera, V, Andreeva, E A, Martel, A, Thureau, A, Longo, M, Petrillo, C, Paciaroni, A, Schiro, G & Comez, L 2021, ' Porphyrin Binding and Irradiation Promote G-Quadruplex DNA Dimeric Structure ', Journal of Physical Chemistry Letters, vol. 12, no. 33, pp. 8096-8102 . https://doi.org/10.1021/acs.jpclett.1c01840
ISSN: 1948-7185
DOI: 10.1021/acs.jpclett.1c01840⟩
Popis: International audience; Nucleic acid sequences rich in guanines can organize into noncanonical DNA G-quadruplexes (G4s) of variable size. The design of small molecules stabilizing the structure of G4s is a rapidly growing area for the development of novel anticancer therapeutic strategies and bottom-up nanotechnologies. Among a multitude of binders, porphyrins are very attractive due to their light activation that can make them valuable conformational regulators of G4s. Here, a structure-based strategy, integrating complementary probes, is employed to study the interaction between TMPyP4 porphyrin and a 22-base human telomeric sequence (Tel22) before and after irradiation with blue light. Porphyrin binding is discovered to promote Tel22 dimerization, while light irradiation of the Tel22-TMPyP4 complex controls dimer fraction. Such a change in quaternary structure is found to be strictly correlated with modifications at the secondary structure level, thus providing an unprecedented link between the degree of dimerization and the underlying conformational changes in G4s.
Databáze: OpenAIRE