Agaribacter marinus gen. nov., sp. nov., an agar-degrading bacterium from surface seawater
| Autor: | Maki Teramoto, Miyuki Nishijima |
|---|---|
| Rok vydání: | 2014 |
| Předmět: |
DNA
Bacterial Ubiquinone Molecular Sequence Data Biology medicine.disease_cause Microbiology chemistry.chemical_compound Japan Genus RNA Ribosomal 16S medicine Seawater Phylogeny Ecology Evolution Behavior and Systematics Phosphatidylglycerol Base Composition Phylogenetic tree Strain (chemistry) Alteromonadaceae Fatty Acids Lysophosphatidylethanolamine Agaribacter marinus Sequence Analysis DNA General Medicine biology.organism_classification 16S ribosomal RNA Bacterial Typing Techniques Agar chemistry Bacteria |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 64:2416-2423 |
| ISSN: | 1466-5034 1466-5026 |
| Popis: | A Gram-stain-negative, motile, mesophilic, aerobic, rod-shaped bacterium, strain 8-8T, was isolated from surface seawater at Muroto, Kochi, Japan. The strain exhibited agar-degrading activity. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain fell within the family Alteromonadaceae and clustered distantly with members of the genus Glaciecola (≤94.0 % similarity). The DNA G+C content was 41.8 mol%. The major fatty acids were C16 : 1ω7c and/or iso-C15 : 0 2-OH, C16 : 0 and C18 : 1ω7c and the major hydroxy fatty acid was C12 : 0 3-OH. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and an unidentified polar lipid; lysophosphatidylethanolamine and unidentified polar lipids were found as minor components. The major quinone was Q-8. On the basis of phenotypic, genotypic and chemotaxonomic data, strain 8-8T represents a novel species of a new genus, for which the name Agaribacter marinus gen. nov., sp. nov. is proposed. The type strain of Agaribacter marinus is 8-8T ( = NBRC 110023T = LMG 28167T). |
| Databáze: | OpenAIRE |
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