Real-time PCR quantification of Vibrio parahaemolyticus in oysters using an alternative matrix
| Autor: | Angelo DePaola, Richard F. Meyer, George M. Blackstone, John C. Bowers, Michael D. Bowen, Asim K. Bej, G. E. Kaufman, Michael C. L. Vickery |
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| Rok vydání: | 2004 |
| Předmět: |
DNA
Bacterial Oyster Time Factors Colony Count Microbial Food Contamination Microbiology Polymerase Chain Reaction Sensitivity and Specificity law.invention law Vibrionaceae biology.animal Animals Polymerase chain reaction Shellfish biology Vibrio parahaemolyticus Temperature food and beverages Hemolysin equipment and supplies Bivalvia biology.organism_classification Ostreidae Culture Media Real-time polymerase chain reaction Food Microbiology bacteria Seasons Food Science |
| Zdroj: | Journal of food protection. 67(11) |
| ISSN: | 0362-028X |
| Popis: | This study examined the relationship between levels of total Vibrio parahaemolyticus found in oyster tissues and mantle fluid with the goal of using mantle fluid as a template matrix in a new quantitative real-time PCR assay targeting the thermolabile hemolysin (tlh) gene for the enumeration of total V. parahaemolyticus in oysters. Oysters were collected near Mobile Bay, Ala., in June, July, and September and tested immediately after collection and storage at 26 degrees C for 24 h. Initial experiments using DNA colony hybridization targeting tlh demonstrated that natural V. parahaemolyticus levels in the mantle fluid of individual oysters were strongly correlated (r = 0.85, P < 0.05) with the levels found in their tissues. When known quantities of cultured V. parahaemolyticus cells were added to real-time PCR reactions that contained mantle fluid and oyster tissue matrices separately pooled from multiple oysters, a strong linear correlation was observed between the real-time PCR cycle threshold and the log concentration of cells inoculated into each PCR reaction (mantle fluid: r = 0.98, P < 0.05; and oyster: r = 0.99, P < 0.05). However, the mantle fluid exhibited less inhibition of the PCR amplification than the homogenized oyster tissue. Analysis of natural V. parahaemolyticus populations in mantle fluids using both colony hybridization and real-time PCR demonstrated a significant (P < 0.05) but reduced correlation (r = -0.48) between the two methods. Reductions in the efficiency of the real-time PCR that resulted from low population densities of V. parahaemolyticus and PCR inhibitors present in the mantle fluid of some oysters (with significant oyster-to-oyster variation) contributed to the reduction in correlation between the methods that was observed when testing natural V. parahaemolyticus populations. The V. parahaemolyticus-specific real-time PCR assay used for this study could estimate elevated V. parahaemolyticus levels in oyster mantle fluid within 1 h from sampling time. |
| Databáze: | OpenAIRE |
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