Bacterial Diversity and Bioprospecting for Cold-Active Lipases, Amylases and Proteases, from Culturable Bacteria of Kongsfjorden and Ny-Ålesund, Svalbard, Arctic
Autor: | T. N. R. Srinivas, Sisinthy Shivaji, B. Sailaja, P. Vishnu Vardhan Reddy, S. S. S. Nageswara Rao, Shiv Mohan Singh, K. Hara Kishore, Zareena Begum, M. S. Pratibha, B. Kavya |
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Rok vydání: | 2009 |
Předmět: |
DNA
Bacterial Geologic Sediments Bacilli Molecular Sequence Data DNA Ribosomal Applied Microbiology and Biotechnology Microbiology Actinobacteria Svalbard Bacterial Proteins Culture Techniques RNA Ribosomal 16S Psychrophile Phylogeny chemistry.chemical_classification Bacteria biology Arctic Regions Bacteroidetes Fatty acid Biodiversity Lipase General Medicine biology.organism_classification 16S ribosomal RNA chemistry Amylases Proteobacteria Peptide Hydrolases |
Zdroj: | Current Microbiology. 59:537-547 |
ISSN: | 1432-0991 0343-8651 |
DOI: | 10.1007/s00284-009-9473-0 |
Popis: | Culturable bacterial diversity of seven marine sediment samples of Kongsfjorden and a sediment and a soil sample from Ny-Alesund, Svalbard, Arctic was studied. The bacterial abundance in the marine sediments of Kongsfjorden varied marginally (0.5 x 10(3)-1.3 x 10(4) cfu/g sediment) and the bacterial number in the two samples collected from the shore of Ny-Alesund also was very similar (0.6 x 10(4) and 3.4 x 10(4), respectively). From the nine samples a total of 103 bacterial isolates were obtained and these isolates could be grouped in to 47 phylotypes based on the 16S rRNA gene sequence belonging to 4 phyla namely Actinobacteria, Bacilli, Bacteroidetes and Proteobacteria. Representatives of the 47 phylotypes varied in their growth temperature range (4-37 degrees C), in their tolerance to NaCl (0.3-2 M NaCl) and growth pH range (2-11). Representatives of 26 phylotypes exhibited amylase and lipase activity either at 5 or 20 degrees C or at both the temperatures. A few of the representatives exhibited amylase and/or lipase activity only at 5 degrees C. None of the phylotypes exhibited protease activity. Most of the phylotypes (38) were pigmented. Fatty acid profile studies indicated that short chain fatty acids, unsaturated fatty acids, branched fatty acids, the cyclic and the cis fatty acids are predominant in the psychrophilic bacteria. |
Databáze: | OpenAIRE |
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