Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1
| Autor: | David Bruce, Tanja Woyke, Rui Tian, Chia-Lin Wei, Sofie E. De Meyer, Amrita Pati, Konstantinos Mavromatis, Marcel Huntemann, Mohamed Ninawi, Nikos C. Kyrpides, James Han, Vanessa Melino, Cliff Han, Ron Yates, Graham O’Hara, Hazuki Teshima, Ioanna Pagani, Roxanne Tapia, Julie Ardley, John Howieson, Lynne Goodwin, Ravi Tiwari, Wayne Reeve, Chris Detter, Victor Markowitz, Jason Terpolilli, Galina Ovchinnikova, Natalia Ivanova, I-Min Chen, Sam Pitluck |
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| Jazyk: | angličtina |
| Rok vydání: | 2013 |
| Předmět: |
LEGUME SEED
PREDICTION DATABASE RNA GENES medicine.disease_cause rhizobia Genome ANNOTATION Rhizobium leguminosarum Rhizobia Botany Genetics medicine TOLERANCE Gene Alphaproteobacteria Whole genome sequencing biology IDENTIFICATION Strain (biology) Biology and Life Sciences food and beverages biology.organism_classification REVISION Short Genome Reports nitrogen fixation BACTERIA Nitrogen fixation root-nodule bacteria NITROGEN-FIXATION |
| Zdroj: | Standards in Genomic Sciences STANDARDS IN GENOMIC SCIENCES |
| ISSN: | 1944-3277 |
| Popis: | Rhizobium leguminosarum bv. trifolii strain TA1 is an aerobic, motile, Gram-negative, non-spore-forming rod that is an effective nitrogen fixing microsymbiont on the perennial clovers originating from Europe and the Mediterranean basin. TA1 however is ineffective with many annual and perennial clovers originating from Africa and America. Here we describe the features of R. leguminosarum bv. trifolii strain TA1, together with genome sequence information and annotation. The 8,618,824 bp high-quality-draft genome is arranged in a 6 scaffold of 32 contigs, contains 8,493 protein-coding genes and 83 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. |
| Databáze: | OpenAIRE |
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