Cloning, Sequencing, and Expression of Selenoprotein Transcripts in the Turkey (Meleagris gallopavo)
| Autor: | Colin M. Sunde, Jacqueline K. Evenson, Gavin R. Sunde, Roger A. Sunde, M. L. Sunde |
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| Rok vydání: | 2015 |
| Předmět: |
Turkeys
Sequence analysis SEPP1 lcsh:Medicine Gene Expression Biology Complementary DNA Animals RNA Messenger Cloning Molecular lcsh:Science Selenoproteins Cloning chemistry.chemical_classification Genetics Multidisciplinary integumentary system Shotgun sequencing cDNA library lcsh:R High-Throughput Nucleotide Sequencing Sequence Analysis DNA biology.organism_classification Molecular biology chemistry lcsh:Q Selenoprotein Meleagris gallopavo Research Article |
| Zdroj: | PLoS ONE PLoS ONE, Vol 10, Iss 6, p e0129801 (2015) |
| ISSN: | 1932-6203 |
| Popis: | The minimum Se requirement for male turkey poults is 0.3 μg Se/g – three times higher than requirements found in rodents – based on liver and gizzard glutathione peroxidase-4 (GPX4) and GPX1 activities. In addition, turkey liver GPX4 activity is 10-fold higher and GPX1 activity is 10-fold lower than in rats, and both GPX1 and GPX4 mRNA levels are dramatically down-regulated by Se deficiency. Currently, the sequences of all annotated turkey selenoprotein transcripts and proteins in the NCBI database are only “predicted.” Thus we initiated cloning and sequencing of the full turkey selenoprotein transcriptome to demonstrate expression of selenoprotein transcripts in the turkey, and to develop tools to investigate Se regulation of the full selenoproteome. Total RNA was isolated from six tissues of Se-adequate adult tom turkeys, and used to prepare reverse-transcription cDNA libraries. PCR primers were designed, based initially on chicken, rodent, porcine, bovine and human sequences and later on turkey shotgun cloning sequences. We report here the cloning of full transcript sequences for 9 selenoproteins, and 3'UTR portions for 15 additional selenoproteins, which include SECIS elements in 22 3'UTRs, and in-frame Sec (UGA) codons within coding regions of 19 selenoproteins, including 12 Sec codons in SEPP1. In addition, we sequenced the gap between two contigs from the shotgun cloning of the turkey genome, and found the missing sequence for the turkey Sec-tRNA. RTPCR was used to determine the relative transcript expression in 6 tissues. GPX3 expression was high in all tissues except kidney, GPX1 expression was high in kidney, SEPW1 expression was high in heart, gizzard and muscle, and SELU expression was high in liver. SEPP2, a selenoprotein not found in mammals, was highly expressed in liver but not in other tissues. In summary, transcripts for 24 selenoproteins are expressed in the turkey, not just predicted. |
| Databáze: | OpenAIRE |
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