Investigation of HIV-1 Gag binding with RNAs and lipids using Atomic Force Microscopy

Autor: Shaolong Chen, A. L. N. Rao, Jun Xu, Roya Zandi, Sarjeet S. Gill, Umar Mohideen, Mingyue Liu
Přispěvatelé: Saad, Jamil S
Rok vydání: 2020
Předmět:
RNA viruses
Phosphatidylinositol 4
5-Diphosphate

viruses
Cell Membranes
Normal Distribution
HIV Infections
Plasma protein binding
Pathology and Laboratory Medicine
Microscopy
Atomic Force

Biochemistry
Physical Chemistry
gag Gene Products
Human Immunodeficiency Virus

chemistry.chemical_compound
Immunodeficiency Viruses
HIV Seropositivity
Microscopy
Medicine and Health Sciences
Nucleotide
Viral
Materials
Gel electrophoresis
chemistry.chemical_classification
0303 health sciences
Multidisciplinary
Chemistry
Monomers
030302 biochemistry & molecular biology
RNA-Binding Proteins
Atomic Force
Lipids
Phosphatidylinositol 4
Infectious Diseases
Monomer
Medical Microbiology
Viral Pathogens
Physical Sciences
Viruses
5-Diphosphate
RNA
Viral

Medicine
HIV/AIDS
Pathogens
Cellular Structures and Organelles
Dimerization
Human Immunodeficiency Virus
Research Article
Protein Binding
Morphology (linguistics)
General Science & Technology
Science
Materials Science
Microbiology
03 medical and health sciences
q-bio.BM
Retroviruses
Genetics
Pi
Humans
Dimers
Microbial Pathogens
gag Gene Products
030304 developmental biology
Lentivirus
Cell Membrane
Organisms
Biology and Life Sciences
HIV
RNA
Biomolecules (q-bio.BM)
Cell Biology
Polymer Chemistry
Probability Theory
Probability Distribution
Chemical Properties
Quantitative Biology - Biomolecules
FOS: Biological sciences
Oligomers
Multiprotein Complexes
HIV-1
Biophysics
Protein Multimerization
Mathematics
Zdroj: PloS one, vol 15, iss 2
PLoS ONE, Vol 15, Iss 2, p e0228036 (2020)
PLoS ONE
ISSN: 1932-6203
Popis: Atomic Force Microscopy was utilized to study the morphology of Gag, {\Psi}RNA, and their binding complexes with lipids in a solution environment with 0.1{\AA} vertical and 1nm lateral resolution. TARpolyA RNA was used as a RNA control. The lipid used was phospha-tidylinositol-(4,5)-bisphosphate (PI(4,5)P2). The morphology of specific complexes Gag-{\Psi}RNA, Gag-TARpolyA RNA, Gag-PI(4,5)P2 and PI(4,5)P2-{\Psi}RNA-Gag were studied. They were imaged on either positively or negatively charged mica substrates depending on the net charges carried. Gag and its complexes consist of monomers, dimers and tetramers, which was confirmed by gel electrophoresis. The addition of specific {\Psi}RNA to Gag is found to increase Gag multimerization. Non-specific TARpolyA RNA was found not to lead to an increase in Gag multimerization. The addition PI(4,5)P2 to Gag increases Gag multimerization, but to a lesser extent than {\Psi}RNA. When both {\Psi}RNA and PI(4,5)P2 are present Gag undergoes comformational changes and an even higher degree of multimerization.
Databáze: OpenAIRE