Robust single-cell DNA methylome profiling with snmC-seq2

Autor: Angeline Rivkin, Antonio Pinto-Duarte, Joseph R. Nery, M. Margarita Behrens, Joseph R. Ecker, Conor Fitzpatrick, Brian Bui, Chongyuan Luo, Seth Ruga, Jingtian Zhou, Rosa Castanon, Carolyn O’Connor, Jacinta Lucero, Marc E. Van Eden, David A. Davis, Laurie Kurihara, Justin P. Sandoval, Deborah C. Mash
Rok vydání: 2018
Předmět:
Zdroj: Nature Communications, Vol 9, Iss 1, Pp 1-6 (2018)
ISSN: 2041-1723
Popis: Single-cell DNA methylome profiling has enabled the study of epigenomic heterogeneity in complex tissues and during cellular reprogramming. However, broader applications of the method have been impeded by the modest quality of sequencing libraries. Here we report snmC-seq2, which provides improved read mapping, reduced artifactual reads, enhanced throughput, as well as increased library complexity and coverage uniformity compared to snmC-seq. snmC-seq2 is an efficient strategy suited for large-scale single-cell epigenomic studies.
Databáze: OpenAIRE