Additional file 1 of Genome-wide interrogation of structural variation reveals novel African-specific prostate cancer oncogenic drivers

Autor: Gong, Tingting, Jaratlerdsiri, Weerachai, Jiang, Jue, Willet, Cali, Chew, Tracy, Patrick, Sean M., Lyons, Ruth J., Haynes, Anne-Maree, Pasqualim, Gabriela, Brum, Ilma Simoni, Stricker, Phillip D., Mutambirwa, Shingai B. A., Sadsad, Rosemarie, Papenfuss, Anthony T., Bornman, Riana M. S., Chan, Eva K. F., Hayes, Vanessa M.
Rok vydání: 2022
DOI: 10.6084/m9.figshare.20762807.v1
Popis: Additional file 1: Figure S1. Concordant SV call generation from Manta and GRIDSS. Figure S2. Summary of SVs in each type, compared to other studies. Figure S3. CIRCOS plot of hyper-SV mutated tumours. Figure S4. The spread of SV breakpoints and samples in each 1 Mbp genomic bin. Figure S5. TMPRSS2-ERG fusion with interstitial region retention. Table S1. Clinical and pathological characteristics of 180 prostate cancer patients included in this study. Table S2. Biallelic assessment of CDK12 in hyper-duplicated samples. Table S3. Biallelic assessment of BRCA2 in hyper-deleted samples.
Databáze: OpenAIRE