An Eleven-microRNA Signature Related to Tumor-Associated Macrophages Predicts Prognosis of Breast Cancer
Autor: | Sharmilla Devi Jayasingam, Marimuthu Citartan, Anani Aila Mat Zin, Timofey S. Rozhdestvensky, Thean-Hock Tang, Ewe Seng Ch’ng |
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Rok vydání: | 2022 |
Předmět: |
Organic Chemistry
Breast Neoplasms General Medicine Catalysis Computer Science Applications Inorganic Chemistry MicroRNAs Tumor-Associated Macrophages Biomarkers Tumor tumor-associated macrophages M1 M2 miRNA breast cancer prognostic biomarker miRNA-21 miRNA-146a Humans Female Physical and Theoretical Chemistry Neoplasm Recurrence Local Molecular Biology Spectroscopy |
Zdroj: | International Journal of Molecular Sciences; Volume 23; Issue 13; Pages: 6994 |
ISSN: | 1422-0067 |
Popis: | The dysregulation of microRNAs (miRNAs) has been known to play important roles in tumor development and progression. However, the understanding of the involvement of miRNAs in regulating tumor-associated macrophages (TAMs) and how these TAM-related miRNAs (TRMs) modulate cancer progression is still in its infancy. This study aims to explore the prognostic value of TRMs in breast cancer via the construction of a novel TRM signature. Potential TRMs were identified from the literature, and their prognostic value was evaluated using 1063 cases in The Cancer Genome Atlas Breast Cancer database. The TRM signature was further validated in the external Gene Expression Omnibus GSE22220 dataset. Gene sets enrichment analyses were performed to gain insight into the biological functions of this TRM signature. An eleven-TRM signature consisting of mir-21, mir-24-2, mir-125a, mir-221, mir-22, mir-501, mir-365b, mir-660, mir-146a, let-7b and mir-31 was constructed. This signature significantly differentiated the high-risk group from the low-risk in terms of overall survival (OS)/ distant-relapse free survival (DRFS) (p value < 0.001). The prognostic value of the signature was further enhanced by incorporating other independent prognostic factors in a nomogram-based prediction model, yielding the highest AUC of 0.79 (95% CI: 0.72–0.86) at 5-year OS. Enrichment analyses confirmed that the differentially expressed genes were mainly involved in immune-related pathways such as adaptive immune response, humoral immune response and Th1 and Th2 cell differentiation. This eleven-TRM signature has great potential as a prognostic factor for breast cancer patients besides unravelling the dysregulated immune pathways in high-risk breast cancer. |
Databáze: | OpenAIRE |
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