RNA sequence analysis data of Peronospora destructor maintained on onions
| Autor: | Akira Kawakami, Atsushi Miyasaka, Takashi Fujikawa, Ryoichi Sonoda, Kazuki Fujiwara |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2018 |
| Předmět: |
Oomycete
Multidisciplinary biology Sporangium fungi Peronospora destructor food and beverages lcsh:Computer applications to medicine. Medical informatics biology.organism_classification Bulb Spore Horticulture Agricultural and Biological Science lcsh:R858-859.7 Allium Downy mildew Destructor lcsh:Science (General) lcsh:Q1-390 |
| Zdroj: | Data in Brief SC40201903070014 NARO成果DBa Data in Brief, Vol 22, Iss, Pp 693-696 (2019) |
| ISSN: | 2352-3409 |
| Popis: | Peronospora destructor (Berk.) is an important biotrophic oomycete that causes downy mildew on onion (Allium Cepa L.) worldwide, especially in humid and temperate regions. The disease attacks bulb and seed production of onion, resulting in losses in yield and quality of bulbs. Epidemiological studies have increased our understanding and control of downy mildew on onion; however, little is known about the molecular aspects of P. destructor behavior during infection. Here, we isolated RNA from four samples of sporangia and sporangiophores of P. destructor, which were maintained by spore inoculation onto onions in a growth chamber. We then used an Ion PGM next generation sequencer to acquire and assemble the RNA sequences of P. destructor. By transcriptome shotgun assembly, we obtained 2335 contigs (N50, 884 nucleotides (nt); mean length, 881.6 nt). The data are accessible at NCBI (BioProject PRJNA391849). Our data resource will facilitate further studies of the molecular events during P. destructor infection. |
| Databáze: | OpenAIRE |
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