| Autor: |
Longbottom, David, Livingstone, Morag, Ribeca, Paolo, Beeckman, Delphine Sylvie Anne, Ende, Arie Van Der, Pannekoek, Yvonne, Vanrompay, Daisy |
| Rok vydání: |
2021 |
| DOI: |
10.6084/m9.figshare.14176118 |
| Popis: |
Additional file 6: Fig. S4. Whole genome phylogenetic analysis. Phylogenetic tree of a whole genome sequence MAFFT alignment of the C. abortus (Cab) and C. psittaci (Cps) strains shown in Table 2, and C. buteonis strain RSHA. The consensus tree was estimated in IQ-Tree by Maximum Likelihood using a TVM + F + R2 substitution and rate heterogeneity model, according to BIC model selection, and 100 non-parametric bootstrap replicates. The tree is midpoint rooted and bootstrap support is indicated by the number at the node. The scale bar indicates the expected substitutions per site. Genotypes are given in square brackets. The tree was prepared in Dendroscope. Strain 84/2334 is in bold and red font. Classical and avian C. abortus strains are in blue and green fonts, respectively. |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
|
