GMDPtoolbox: A Matlab library for designing spatial management policies. Application to the long-term collective management of an airborne disease

Autor: Jean-Noël Aubertot, Régis Sabbadin, Nathalie Peyrard, Marie-Josée Cros
Přispěvatelé: Unité de Mathématiques et Informatique Appliquées de Toulouse (MIAT INRA), Institut National de la Recherche Agronomique (INRA), AGroécologie, Innovations, teRritoires (AGIR), Institut National de la Recherche Agronomique (INRA)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, This work has been partly supported by the European Union Seventh Framework Program (FP7/ 2007-2013) under the grant agreement n265865- PURE.This study was also funded by the project AGROBIOSE, ANR-13-AGRO-0001,AGROBIOSE,Biodiversité et services écosystémiques en agro-écosystèmes céréaliers intensifs : utilisation des concepts de l'agro-écologie pour atteindre les objectifs ECOPHYTO 2018(2013)
Jazyk: angličtina
Rok vydání: 2017
Předmět:
0106 biological sciences
Computer science
[SDV]Life Sciences [q-bio]
Culture
lcsh:Medicine
Social Sciences
Ecological systems theory
01 natural sciences
[SHS]Humanities and Social Sciences
Sociology
[MATH]Mathematics [math]
lcsh:Science
Multidisciplinary
Ecology
Applied Mathematics
Simulation and Modeling
Eukaryota
Agriculture
04 agricultural and veterinary sciences
Plants
Environmental Policy
Risk analysis (engineering)
[SDE]Environmental Sciences
Wheat
Physical Sciences
Algorithms
Research Article
Conservation of Natural Resources
Forest management
Control (management)
Crops
Research and Analysis Methods
Communicable Diseases
Barley
Humans
[INFO]Computer Science [cs]
Grasses
Agroecology
lcsh:R
Ecology and Environmental Sciences
Organisms
Biology and Life Sciences
15. Life on land
Crop Management
Term (time)
Communicable disease transmission
040103 agronomy & agriculture
0401 agriculture
forestry
and fisheries

lcsh:Q
Markov decision process
Mathematics
010606 plant biology & botany
Crop Science
Cereal Crops
Zdroj: PLoS ONE
PLoS ONE, Public Library of Science, 2017, 12 (10), 18 p. ⟨10.1371/journal.⟩
PLoS ONE, Vol 12, Iss 10, p e0186014 (2017)
ISSN: 1932-6203
DOI: 10.1371/journal.⟩
Popis: International audience; Designing management policies in ecology and agroecology is complex. Several components must be managed together while they strongly interact spatially. Decision choices must be made under uncertainty on the results of the actions and on the system dynamics. Furthermore, the objectives pursued when managing ecological systems or agroecosystems are usually long term objectives, such as biodiversity conservation or sustainable crop production. The framework of Graph-Based Markov Decision Processes (GMDP) is well adapted to the qualitative modeling of such problems of sequential decision under uncertainty. Spatial interactions are easily modeled and integrated control policies (combining several action levers) can be designed through optimization. The provided policies are adaptive, meaning that management actions are decided at each time step (for instance yearly) and the chosen actions depend on the current system state. This framework has already been successfully applied to forest management and invasive species management. However, up to now, no ªeasy-to-useº implementation of this framework was available. We present GMDPtoolbox, a Matlab toolbox which can be used both for the design of new management policies and for comparing policies by simulation. We provide an illustration of the use of the toolbox on a realistic crop disease management problem: the design of long term management policy of blackleg of canola using an optimal combination of three possible cultural levers. This example shows how GMDPtoolbox can be used as a tool to support expert thinking.
Databáze: OpenAIRE