Prevalence of ESBL genes in Klebsiella pneumoniae from individuals with community-acquired urinary tract infection in rural communities of Enugu State, Nigeria

Autor: Chinedu, Aneke Christian, Enebe Joseph Tochukwu, Ezeah Gabriel Anibueze, Enebe Nympha Onyinye
Rok vydání: 2022
Předmět:
Zdroj: GSC Biological and Pharmaceutical Sciences. 19:294-303
ISSN: 2581-3250
DOI: 10.30574/gscbps.2022.19.3.0249
Popis: Background:The emergence and spread of extended-spectrum beta-lactamase (ESBL) producing Enterobacteriaceae is now a major challenge in treating urinary tract infections. This study was conducted to determine the Prevalence of ESBL genes inKlebsiella pneumoniaeand the influence of these genes on the antimicrobial susceptibility patterns of the isolates, obtained from community acquired urinary tract infection in Enugu state rural communities. Method:A total of 735 clean catch mid-stream urine samples were collected from February, 2021 to June, 2021. The urine samples were cultured andKlebsiella pneumoniaewere identified morphologically, biochemically, and then typed down, using PCR, Gel electrophoresis, and Sanger Sequencing by Genewiz. Antibiotic susceptibility testing was done by modified Kirby-Bauer disc diffusion method and interpretation was done following Clinical and Laboratory Standard Institute (CLSI) guidelines. ESBL screening was done by the phenotypic method, using the standard disk diffusion method, whereas the phenotypic confirmation of ESBL producers was done by the double-disk synergy method, and interpreted according to CLSI guidelines. Multiplex PCR was used to detect the genes for SHV and CTX-M while conventional linear PCR was done for TEM andblasGES type ESBL genes. Results:A total of 77 isolates were identified asKlebsiella pneumoniae, and the prevalence of positive ESBL in them were 10(12.9%). Of the 77 isolates that were tested for antibiogram, 29 isolates were multidrug-resistance (MDR). Out of the MDR isolates, 10 were ESBL positive, whereas 19 were not. Of this 29 MDR isolates, 6 were extensively-drug resistant (XDR). Of the 6 XDR isolates, 3 do not possess ESBL enzymes, whereas 3 of them do. Age range of 31-40 contributed the highest prevalence of ESBL genes (60%), whereas age range of 10-20, 21-30, and 51-70 did not produce any ESBL gene.blaTEM gene was the most prevalent ESBL resistant genes with a prevalence of 10 (100%), followed by SHV 9(90%), whereasblaGES gene andblaCTX-M have the least prevalence of 4 (40%) each. Conclusion:Higher prevalence of MDR, XDR, and ESBL-producingKlebsiella pneumoniaewere observed, thus the need for public health intervention for effective prevention and control of antimicrobial resistance, and proper treatment of UTIs.
Databáze: OpenAIRE