Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus, Nilsson 1831)
| Autor: | Craig T. Michell, Jaakko L. O. Pohjoismäki, Göran Spong, Carl-Gustaf Thulin |
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| Rok vydání: | 2022 |
| Předmět: |
Sweden
Statistics and Probability Genome Polymorphism Genetic Sequence Analysis DNA Library and Information Sciences Hares Computer Science Applications Education Animal and Dairy Science Bioinformatics and Systems Biology (methods development to be 10203) Animals Statistics Probability and Uncertainty Information Systems |
| Zdroj: | Scientific Data. 9 |
| ISSN: | 2052-4463 |
| DOI: | 10.1038/s41597-022-01794-5 |
| Popis: | We provide the first whole genome sequences from three specimens of the mountain hare subspecies the heath hare (Lepus timidus sylvaticus), along with samples from two mountain hares (Lepus timidus timidus) and two brown hares (Lepus europaeus) from Sweden. The heath hare has a unique grey winter pelage as compared to other mountain hares (white) and brown hares (mostly brown), and face regional extinction, likely due to competitive exclusion from the non-native brown hare. Whole genome resequencing from the seven hare specimens were mapped to the Lepus timidus pseudoreference genome and used for detection of 11,363,883 polymorphic nucleotide positions. The data presented here could be useful for addressing local adaptations and conservation status of mountain hares and brown hares in Sweden, including unique subspecies. |
| Databáze: | OpenAIRE |
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