Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing

Autor:	Zaid Abdo, Steven M. Lakin, Jennifer N. Martin, Paul S. Morley, Enrique Doster, Maggie E. Weinroth, Christopher J Dean, Christina Boucher, Noelle R. Noyes, Pablo Rovira, Jennifer K. Parker, Jaime Ruiz, Robert Raymond, Keith E. Belk, Kenneth L. Jones
Jazyk:	angličtina
Rok vydání:	2017
Předmět:	0301 basic medicine Microbiology (medical) 030106 microbiology Population Shotgun Computational biology Biology Antimicrobial resistance Microbiology Resistome lcsh:Microbial ecology Microbial ecology 03 medical and health sciences Antibiotic resistance Humans Microbiome education Gene education.field_of_study Virulence Whole Genome Sequencing Research Microbiota Drug Resistance Microbial Rare microbiome 030104 developmental biology Metagenomics Molecular enrichment lcsh:QR100-130
Zdroj:	Microbiome, Vol 5, Iss 1, Pp 1-13 (2017) Microbiome
ISSN:	2049-2618
Popis:	Background Shotgun metagenomic sequencing is increasingly utilized as a tool to evaluate ecological-level dynamics of antimicrobial resistance and virulence, in conjunction with microbiome analysis. Interest in use of this method for environmental surveillance of antimicrobial resistance and pathogenic microorganisms is also increasing. In published metagenomic datasets, the total of all resistance- and virulence-related sequences accounts for
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9d24f1a4613b1f79318c0b01585c32a7 http://link.springer.com/article/10.1186/s40168-017-0361-8 Zobrazit plný text záznamu Full text from SpringerLink