Association of four gene polymorphisms in Chinese Guangxi population with diabetic retinopathy in type 2 diabetic patients
| Autor: | Zhixiang Ding, Liu Zheng, Yu Xiong, Binbin Yang, Dongdong Jiang, He Jin, Xinsheng Zeng, Miaoyun Liao |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2021 |
| Předmět: |
KASP genotyping assays
medicine.medical_specialty China Genotype endocrine system diseases Population Genome-wide association study Single-nucleotide polymorphism Gastroenterology Polymorphism Single Nucleotide Gene Frequency Diabetic retinopathy Internal medicine Diabetes mellitus Type 2 diabetes mellitus Medicine Humans education Allele frequency education.field_of_study business.industry Research General Medicine Odds ratio Single nucleotide polymorphisms RE1-994 medicine.disease Ophthalmology Diabetes Mellitus Type 2 Case-Control Studies business Genome-Wide Association Study |
| Zdroj: | BMC Ophthalmology, Vol 21, Iss 1, Pp 1-7 (2021) BMC Ophthalmology |
| ISSN: | 1471-2415 |
| Popis: | s Background Diabetic retinopathy (DR) is one of the most common chronic microvascular complications of diabetes. Many studies have suggested that genetic factors are important in the context of DR. This study evaluated the associations of GWAS (Genome-wide association study) -identified DR-associated SNPs in a Chinese population in Guangxi Province with type 2 diabetes mellitus (T2DM). Methods A total of 386 hospitalized T2DM patients without proliferative diabetic retinopathy (PDR) and 316 hospitalized T2DM patients with PDR were included in this case–control study. Four tag SNPs, including rs1800896 in the IL-10 gene, rs2010963 in the VEGFA gene, rs2070600 in the RAGE gene and rs2910164 in the miR-146a gene, were examined using KASP (kompetitive allele specific PCR) genotyping assays. Results There were no significant differences in the genotype or allele frequencies of the miR-146a polymorphism (rs2910164) between subjects with PDR and those without DR. The TC genotype of rs1800896 was determined to be associated with an increased risk of PDR (the odds ratio (OR) was 2.366, with a 95% confidence interval (CI) ranging from 1.144 to 4.894). The CG genotypes of rs2010963 was associated with an decreased risk of PDR (the OR was 0.588, with a 95% CI ranging from 0.366 to 0.946). Regarding rs2070600, 2 genotypes (TT and CT) were associated with a decreased risk of PDR (the OR of the TT genotype was 0.180, with a 95% CI ranging from 0.037 to 0.872, and the OR of the CT genotype was 0.448, with a 95% CI ranging from 0.266 to 0.753). Conclusions The rs1800896 polymorphisms in the IL-10 gene, rs2010963 in the VEGFA gene and rs2070600 in the RAGE gene are associated with the risk of PDR in the Han Chinese population of Guangxi Province. Our findings provide suggestive evidence that these polymorphisms may be involved in the pathogenesis of PDR and should be investigated further. |
| Databáze: | OpenAIRE |
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