The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters
| Autor: | Marnix H. Medema, Victòria Pascal Andreu, Emmanuel L. C. de los Santos, Francesco Del Carratore, Kai Blin, Tilmann Weber, Sang Yup Lee |
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| Jazyk: | angličtina |
| Rok vydání: | 2019 |
| Předmět: |
Microbial Genomes
Bioinformatics Secondary Metabolism Bacterial genome size Biology Secondary metabolite computer.software_genre Genome 03 medical and health sciences 0302 clinical medicine Databases Genetic Bioinformatica Genetics medicine Life Science Database Issue Gene 030304 developmental biology 0303 health sciences Database Molecular Sequence Annotation Multigene Family Genome mining Microbial genome computer 030217 neurology & neurosurgery Genome Bacterial Software medicine.drug |
| Zdroj: | Blin, K, Pascal Andreu, V, de Los Santos, E L C, Del Carratore, F, Lee, S Y, Medema, M H & Weber, T 2019, ' The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters ', Nucleic Acids Research, vol. 47, no. D1, pp. D625–D630 . https://doi.org/10.1093/nar/gky1060 Blin, K, Pascal Andreu, V, De Los Santos, E L C, Del Carratore, F, Lee, S Y, Medema, M H & Weber, T 2018, ' The antiSMASH database version 2: A comprehensive resource on secondary metabolite biosynthetic gene clusters ', Nucleic acids research, vol. 47, no. D1, pp. D625–D630 . https://doi.org/10.1093/nar/gky1060 Nucleic Acids Research Nucleic acids research 47 (2019) D1 Nucleic acids research, 47(D1), D625-D630 |
| ISSN: | 0305-1048 |
| Popis: | Natural products originating from microorganisms are frequently used in antimicrobial and anticancer drugs, pesticides, herbicides or fungicides. In the last years, the increasing availability of microbial genome data has made it possible to access the wealth of biosynthetic clusters responsible for the production of these compounds by genome mining. antiSMASH is one of the most popular tools in this field. The antiSMASH database provides pre-computed antiSMASH results for many publicly available microbial genomes and allows for advanced cross-genome searches. The current version 2 of the antiSMASH database contains annotations for 6200 full bacterial genomes and 18,576 bacterial draft genomes and is available at https://antismash-db.secondarymetabolites.org/. |
| Databáze: | OpenAIRE |
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