Genetic Characterization of Clavibacter michiganensis subsp michiganensis Population in Turkey
| Autor: | Yeşim Aysan, Yusuf Sen, Richard G. F. Visser, Sjaak van Heusden, Mustafa Mirik, Duygu Ozdemir, Fien Meijer-Dekens, Jan M. van der Wolf |
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| Přispěvatelé: | Çukurova Üniversitesi |
| Jazyk: | angličtina |
| Rok vydání: | 2018 |
| Předmět: |
0106 biological sciences
0301 basic medicine Turkey PBR Breeding for Quality Evolution Sequence analysis Genotypes Population structure Population Plant Science 01 natural sciences Tomato Microbiology Clusters 03 medical and health sciences Biointeractions and Plant Health Laboratorium voor Plantenveredeling Actinomycetales Life Science Region education PBR Resistance in Solanaceae education.field_of_study Genes Essential Bacterial Canker Ssp Michiganensis biology Phylogenetic Analysis biology.organism_classification PBR Breeding for Resistance in Solanaceae PE&RC Recombination Housekeeping gene Plant Breeding 030104 developmental biology Genes Bacterial Mutation Multilocus sequence typing EPS Agronomy and Crop Science Clavibacter michiganensis 010606 plant biology & botany Multilocus Sequence Typing |
| Zdroj: | Plant Disease, 102(2), 300-308 Plant Disease 102 (2018) 2 |
| ISSN: | 0191-2917 |
| Popis: | PubMedID: 30673530 The pathogenic gram-positive bacterium Clavibacter michiganensis subsp. michiganensis (Smith) Davis et al. is the most harmful bacterium to tomatoes in many countries with a cooler climate. Multilocus sequence analysis was performed on five housekeeping genes (bipA, gyrB, kdpA, ligA, and sdhA) and three virulence-related genes (ppaA, chpC, andtomA) todetermine evolutionary relationships and population structure of 108 C. michiganensis subsp. michiganensis strains collected from Turkey between 1996 and 2012. Based on these analyses, we concluded that C. michiganensis subsp. michiganensis in Turkey is highly uniform. However, at least four novel C. michiganensis subsp. michiganensis strains were recently introduced, possibly at the beginning of the 1990s. The singletons might point to additional sources or to strains that have evolved locally in Turkey. © 2018 The American Phytopathological Society. |
| Databáze: | OpenAIRE |
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