Janibacter terrae sp. nov., a bacterium isolated from soil around a wastewater treatment plant
| Autor: | Yong Ha Park, Seok Sung Kang, Yung Hee Kho, Keun Chul Lee, Jung Hoon Yoon, Kook Hee Kang |
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| Rok vydání: | 2000 |
| Předmět: |
DNA
Bacterial Molecular Sequence Data Diamino acid Biology DNA Ribosomal Waste Disposal Fluid Microbiology chemistry.chemical_compound RNA Ribosomal 16S Actinomycetales Phylogeny Soil Microbiology Ecology Evolution Behavior and Systematics chemistry.chemical_classification Base Composition Phylogenetic tree Fatty Acids Nucleic Acid Hybridization Fatty acid Sequence Analysis DNA General Medicine Ribosomal RNA 16S ribosomal RNA biology.organism_classification Bacterial Typing Techniques chemistry Soil microbiology Bacteria Waste disposal |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 50:1821-1827 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/00207713-50-5-1821 |
| Popis: | A bacterial strain, CS12T, which was isolated from soil around a wastewater treatment plant, was subjected to a polyphasic taxonomic study using phenotypic characterizations and genetic methods. The cell wall of strain CS12T contains meso-diaminopimelic acid as the diamino acid but no arabinose and galactose. The predominant menaquinone is MK-8(H4). Mycolic acids are absent. Strain CS12T has a cellular fatty acid profile containing saturated, unsaturated, branched and 10-methyl fatty acids. The major fatty acids are iso-C16:0, C18:1 omega9c and anteiso-C17:0, The G+C content is 69 mol%. A phylogenetic tree based on 16S rDNA sequences showed that strain CS12T forms an evolutionary lineage within the radiation enclosing the members of the family Intrasporangiaceae and, in particular, a coherent cluster with Janibacter limosus DSM 11140T. The level of 16S rDNA similarity between strain CS12T and J. limosus DSM 11140T is 98.7%. The phenotypic characteristics and DNA-DNA relatedness data indicate that strain CS12T should be distinguished from J. limosus DSM 11140T. Therefore, on the basis of the data presented, a new species of the genus Janibacter, Janibacter terrae, is proposed. The type strain of the new species is strain CS12T (= KCCM 80001T = JCM 10705T). |
| Databáze: | OpenAIRE |
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