Vibrio galatheae sp. nov., a member of the family Vibrionaceae isolated from a mussel
| Autor: | Ramona Valentina Mateiu, Lone Gram, Henrique Machado, Sonia Giubergia |
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| Rok vydání: | 2016 |
| Předmět: |
DNA
Bacterial 0301 basic medicine Sequence analysis Molecular Sequence Data Biology Microbiology 03 medical and health sciences Phylogenetics RNA Ribosomal 16S Animals 14. Life underwater Phylogeny Ecology Evolution Behavior and Systematics Vibrio Base Composition Phylogenetic tree Strain (biology) Fatty Acids Nucleic Acid Hybridization Sequence Analysis DNA General Medicine Ribosomal RNA 16S ribosomal RNA Bacterial Typing Techniques Bivalvia Housekeeping gene 030104 developmental biology Genes Bacterial Multilocus sequence typing Melanesia Multilocus Sequence Typing |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 66:347-352 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/ijsem.0.000723 |
| Popis: | Based on genetic, chemotaxonomic and phenotypic characteristics, a novel species belonging to the genus Vibrio is described. The facultatively anaerobic strain S2757T was isolated from a mussel collected in the Solomon Sea (Solomon Islands). Phylogenetic analyses based on sequences of 16S rRNA and fur genes indicated affiliation of the strain to a novel species. This observation was supported by a multilocus sequence analysis including sequences of the housekeeping genes 16S rRNA, gyrB, pyrH, recA and topA. In silico DNA-DNA hybridization and average nucleotide identity values comparing the genomic sequence of strain S2757T with those of closely related type strains were lower than 23 and 82 %, respectively. The DNA G+C content of the strain was 45.3 mol%. Phenotypic and chemotaxonomic analyses clearly differentiated the strain from other Vibrio species. Hence, strain S2757T should be considered to represent a novel species of the genus Vibrio, for which the name Vibrio galatheae sp. nov. is proposed. The type strain is S2757T ( = DSM 100497T = LMG 28895T). |
| Databáze: | OpenAIRE |
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