Complete chloroplast genome of Prunus fruticosa and its implications for the phylogenetic position within Prunus sensulato (Rosaceae)
Autor: | Yu-Xin Yang, Mi-Hui Tian, Yue-Ling Li, Zhong-Shuai Sun, Xin-Hong Liu |
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Jazyk: | angličtina |
Rok vydání: | 2020 |
Předmět: |
0106 biological sciences
0301 basic medicine biology Phylogenetic tree Prunus fruticosa Rosaceae phylogenomics Prunus sensu lato biology.organism_classification 010603 evolutionary biology 01 natural sciences Genome Prunus fruticose Chloroplast Prunus pensylvanica 03 medical and health sciences Prunus 030104 developmental biology Phylogenomics Botany Genetics chloroplast genome Molecular Biology Mitogenome Announcement Research Article |
Zdroj: | Mitochondrial DNA. Part B, Resources article-version (VoR) Version of Record |
ISSN: | 2380-2359 |
Popis: | Prunus fruticosa is a wild species of Prunus distributed across the central Eurasia. Here, we reported the complete chloroplast (cp) genome of P. fruticosa (GenBank accession number: MT916286). The cp genome was 158,217 bp long, with a large single-copy region (LSC) of 86,322 bp and a small single-copy region (SSC) of 19,153 bp separated by a pair of inverted repeats (IRs) of 26,371 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of Prunus sensu lato using maximum likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis indicated that P. fruticosa is closely related with Prunus avium. |
Databáze: | OpenAIRE |
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