Genetic diversity of the African malaria vector Anopheles gambiae

Autor: Matthew W. Hahn, Alison T. Isaacs, Samantha M. O’Loughlin, Tiago Antao, Austin Burt, Mara K. N. Lawniczak, Dominic P. Kwiatkowski, Christina M. Bergey, Michelle M. Riehle, Giordano Bottà, Boubacar Coulibaly, Martin J. Donnelly, Joao Dinis, Alessandra della Torre, Kirk A. Rockett, Krzysztof Kozak, Andrew D. Kern, Christina Hubbart, Nohal Elissa, Kate Rowlands, Bradley J. White, Eleanor Drury, Rachel Giacomantonio, Craig S. Wilding, Ian J. Wright, Kenneth D. Vernick, Michael C. Fontaine, Diego Ayala, Alistair Miles, Kyanne R. Rohatgi, Daniel Mead, Arlete D. Troco, Philip Bejon, Jim Stalker, Janet Midega, Nicholas J. Harding, Abdoulaye Diabaté, Nora J. Besansky, Henry D. Mawejje, Cinzia Malangone, Daniel R. Schrider, Paul Vauterin, H. Charles J. Godfray, Charles M. Mbogo, Igor V. Sharakhov, Anna E. Jeffreys, Seth Redmond, João Pinto, Dushyanth Jyothi, Chris S Clarkson, Victoria Cornelius, Krzysztof Kluczynski, Carlo Costantini, Lee Hart, Richard D. Pearson, Daniel E. Neafsey, Christa Henrichs, Bronwyn MacInnis, David Weetman, Beniamino Caputo, Ben Jeffery
Přispěvatelé: The Royal Society, Bill & Melinda Gates Foundation, Silicon Valley Community Foundation, Medical Research Council (MRC), Diversity, ecology, evolution & Adaptation of arthropod vectors (MIVEGEC-DEEVA), Evolution des Systèmes Vectoriels (ESV), Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Groningen Institute for Evolutionary Life Sciences [Groningen] (GELIFES), University of Groningen [Groningen], Fontaine lab
Jazyk: angličtina
Rok vydání: 2017
Předmět:
Male
0106 biological sciences
0301 basic medicine
Mosquito Control
POSITIVE SELECTION
Anopheles gambiae
FLOW
Genome
Insect

Web application development
Guinea-Bissau
01 natural sciences
Genome
Partner working group
Gene flow
Insecticide Resistance
Kenya
Effective population size
[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseases
RA0421
Gabon
Sequencing and data production
ComputingMilieux_MISCELLANEOUS
Multidisciplinary
biology
Uganda
[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]
INTROGRESSION
genomics
malaria
anopheles gambiae
Anopheles
Project coordination
Crosses
3. Good health
MOSQUITO
Multidisciplinary Sciences
Mosquito control
QR180
Science & Technology - Other Topics
Female
Burkina Faso
Sample collections—Angola
Gene Flow
X Chromosome
General Science & Technology
Data analysis group
Mosquito Vectors
Polymorphism
Single Nucleotide

010603 evolutionary biology
Article
QH301
03 medical and health sciences
CULICIDAE
Cameroon
parasitic diseases
DIVERGENCE
Animals
Anopheles gambiae 1000 Genomes Consortium
POPULATION-STRUCTURE
INCIPIENT SPECIATION
Population Density
Genetic diversity
Science & Technology
Gene Drive Technology
Genetic Variation
Guinea
biology.organism_classification
Malaria
030104 developmental biology
Evolutionary biology
DROSOPHILA-MELANOGASTER
Africa
Threatened species
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
RESISTANCE
Zdroj: Nature
Nature, Nature Publishing Group, 2017, 552 (7683), pp.96-100. ⟨10.1038/nature24995⟩
Nature, 552(7683), 96-100. Nature Publishing Group
ISSN: 0028-0836
1476-4679
DOI: 10.1038/nature24995⟩
Popis: The sustainability of malaria control in Africa is threatened by the rise of insecticide resistance in Anopheles mosquitoes, which transmit the disease(1). To gain a deeper understanding of how mosquito populations are evolving, here we sequenced the genomes of 765 specimens of Anopheles gambiae and Anopheles coluzzii sampled from 15 locations across Africa, and identified over 50 million single nucleotide polymorphisms within the accessible genome. These data revealed complex population structure and patterns of gene flow, with evidence of ancient expansions, recent bottlenecks, and local variation in effective population size. Strong signals of recent selection were observed in insecticide-resistance genes, with several sweeps spreading over large geographical distances and between species. The design of new tools for mosquito control using gene-drive systems will need to take account of high levels of genetic diversity in natural mosquito populations.
Databáze: OpenAIRE