Norwegian e-Infrastructure for Life Sciences (NeLS)
| Autor: | Christian Andreetta, Kjell Petersen, Eivind Hovig, Erik Hjerde, Kjetil Klepper, Morten Beck Rye, Jeevan Karloss Antony Samy, Finn Drabløs, Teshome Dagne Mulugeta, Dag Inge Våge, Wei Zhang, Matúš Kalaš, Abdulrahman Azab, Nils Peder Willassen, Lars Ailo Bongo, Inge Alexander Raknes, Inge Jonassen, Xiaxi Li, Ståle Nygård, Ghislain Fornous, Kidane M. Tekle, Sveinung Gundersen |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2018 |
| Předmět: |
0301 basic medicine
Service (systems architecture) VDP::Teknologi: 500::Informasjons- og kommunikasjonsteknologi: 550::Datateknologi: 551 VDP::Technology: 500::Information and communication technology: 550::Computer technology: 551 Interface (Java) Computer science federated authentication Information Storage and Retrieval Microservices General Biochemistry Genetics and Molecular Biology Biological Science Disciplines World Wide Web integration API 03 medical and health sciences microservices Data file VDP::Mathematics and natural science: 400::Zoology and botany: 480 Humans General Pharmacology Toxicology and Pharmaceutics Data management and sharing computer.programming_language General Immunology and Microbiology Application programming interface Information Dissemination Norway Secure Shell compute and storage infrastructure High-Throughput Nucleotide Sequencing General Medicine ELIXIR Norway Galaxy 030104 developmental biology Workflow Database Management Systems Elixir (programming language) computer VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 |
| Zdroj: | 7:968 F1000 Research |
| ISSN: | 2046-1402 |
| Popis: | The Norwegian e-Infrastructure for Life Sciences (NeLS) has been developed by ELIXIR Norway to provide its users with a system enabling data storage, sharing, and analysis in a project-oriented fashion. The system is available through easy-to-use web interfaces, including the Galaxy workbench for data analysis and workflow execution. Users confident with a command-line interface and programming may also access it through Secure Shell (SSH) and application programming interfaces (APIs). NeLS has been in production since 2015, with training and support provided by the help desk of ELIXIR Norway. Through collaboration with NorSeq, the national consortium for high-throughput sequencing, an integrated service is offered so that sequencing data generated in a research project is provided to the involved researchers through NeLS. Sensitive data, such as individual genomic sequencing data, are handled using the TSD (Services for Sensitive Data) platform provided by Sigma2 and the University of Oslo. NeLS integrates national e-infrastructure storage and computing resources, and is also integrated with the SEEK platform in order to store large data files produced by experiments described in SEEK. In this article, we outline the architecture of NeLS and discuss possible directions for further development Copyright: © 2018 Tekle KM et al. This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|