MIxS-HCR: A MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
| Autor: | Nikos C. Kyrpides, Bart P. Lomans, Peter C. Marks, Pelin Yilmaz, Ian M. Head, Nicolas Tsesmetzis |
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| Jazyk: | angličtina |
| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
Petroleum production Database business.industry 030106 microbiology Sequence data Extension (predicate logic) Biology computer.software_genre Hydrocarbon resources Biotechnology Metadata 03 medical and health sciences 030104 developmental biology Data sequences MIxS standards Environmental package Commentary Genetics Biochemistry and Cell Biology business computer |
| Zdroj: | Tsesmetzis, N; Yilmaz, P; Marks, PC; Kyrpides, NC; Head, IM; & Lomans, BP. (2016). MIxS-HCR: A MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources. Standards in Genomic Sciences, 11(1). doi: 10.1186/s40793-016-0203-5. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/8ck8p5tf Standards in genomic sciences, vol 11, iss 1 Standards in Genomic Sciences |
| Popis: | Here we introduce a MIxS extension to facilitate the recording and cataloguing of metadata from samples related to hydrocarbon resources. The proposed MIxS-HCR package incorporates the core features of the MIxS standard for marker gene (MIMARKS) and metagenomic (MIMS) sequences along with a hydrocarbon resources customized environmental package. Adoption of the MIxS-HCR standard will enable the comparison and better contextualization of investigations related to hydrocarbon rich environments. The insights from such standardized way of reporting could be highly beneficial for the successful development and optimization of hydrocarbon recovery processes and management of microbiological issues in petroleum production systems. Electronic supplementary material The online version of this article (doi:10.1186/s40793-016-0203-5) contains supplementary material, which is available to authorized users. |
| Databáze: | OpenAIRE |
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