The genetics underlying natural variation of plant-plant interactions, a beloved but forgotten member of the family of biotic interactions

Autor: Etienne-Pascal Journet, Jean-Benoit Morel, Cyril Libourel, Harihar Jaishree Subrahmaniam, Sylvain Raffaele, Stéphane Muños, Andreas Niebel, Fabrice Roux
Přispěvatelé: Laboratoire des interactions plantes micro-organismes (LIPM), Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS), AGroécologie, Innovations, teRritoires (AGIR), Institut National de la Recherche Agronomique (INRA)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Biologie et Génétique des Interactions Plante-Parasite (UMR BGPI), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 (Evo-Eco-Paléo), Université de Lille-Centre National de la Recherche Scientifique (CNRS), University of Toulouse, Region Midi-Pyrenees (CLIMARES project), INRA Sante des Plantes et Environnement department (RESURRECTION project), ANR-11-IDEX-0002,UNITI,Université Fédérale de Toulouse(2011), European Project: 336808,EC:FP7:ERC,ERC-2013-StG,VARIWHIM(2013), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Recherche Agronomique (INRA), UMR : AGroécologie, Innovations, TeRritoires, Ecole Nationale Supérieure Agronomique de Toulouse, Université de Toulouse (UT)-Université de Toulouse (UT), Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 (Evo-Eco-Paléo (EEP))
Jazyk: angličtina
Rok vydání: 2018
Předmět:
0106 biological sciences
0301 basic medicine
QTL mapping
Candidate gene
Light
Plant Exudates
mutualism
Quantitative Trait Loci
cooperation
Plant Science
Biology
Quantitative trait locus
Natural variation
01 natural sciences
Life history theory
[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics
03 medical and health sciences
Genetics
Photosynthesis
Cell wall modification
GWA mapping
Plant Physiological Phenomena
ComputingMilieux_MISCELLANEOUS
2. Zero hunger
parasitic plant
Volatile Organic Compounds
Microbiota
fungi
Genetic Variation
food and beverages
Cell Biology
15. Life on land
Meristem
diffuse biotic interactions
Commensalism
Genetic architecture
030104 developmental biology
altruism
Evolutionary biology
allelopathy
gene expression
Protein Processing
Post-Translational
competition
Signal Transduction
010606 plant biology & botany
Zdroj: Plant Journal
Plant Journal, Wiley, 2018, 93 (4), pp.747-770. ⟨10.1111/tpj.13799⟩
The Plant Journal
The Plant Journal, 2018, 93 (4), pp.747-770. ⟨10.1111/tpj.13799⟩
Plant Journal, 2018, 93 (4), pp.747-770. ⟨10.1111/tpj.13799⟩
ISSN: 0960-7412
1365-313X
Popis: BGPI : équipe 4 Interactions Céréales Agents Pathogènes (ICAP); International audience; Despite the importance of plant-plant interactions on crop yield and plant community dynamics, our understanding of the genetic and molecular bases underlying natural variation of plant-plant interactions is largely limited in comparison with other types of biotic interactions. By listing 63 quantitative trait loci (QTL) mapping and global gene expression studies based on plants directly challenged by other plants, we explored whether the genetic architecture and the function of the candidate genes underlying natural plant-plant interactions depend on the type of interactions between two plants (competition versus commensalism versus reciprocal helping versus asymmetry). The 16 transcriptomic studies are unevenly distributed between competitive interactions (n = 12) and asymmetric interactions (n = 4, all focusing on response to parasitic plants). By contrast, 17 and 30 QTL studies were identified for competitive interactions and asymmetric interactions (either weed suppressive ability or response to parasitic plants), respectively. Surprisingly, no studies have been carried out on the identification of genetic and molecular bases underlying natural variation in positive interactions. The candidate genes underlying natural plant-plant interactions can be classified into seven categories of plant function that have been identified in artificial environments simulating plant-plant interactions either frequently (photosynthesis, hormones), only recently (cell wall modification and degradation, defense pathways against pathogens) or rarely (ABC transporters, histone modification and meristem identity/life history traits). Finally, we introduce several avenues that need to be explored in the future to obtain a thorough understanding of the genetic and molecular bases underlying plant-plant interactions within the context of realistic community complexity.
Databáze: OpenAIRE
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