Complete genome sequence of Pseudomonas corrugata strain RM1-1-4, a stress protecting agent from the rhizosphere of an oilseed rape bait plant
| Autor: | Gabriele Berg, Christin Zachow, R. Tilcher, Christina M. Laireiter, Henry Müller |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2017 |
| Předmět: |
0301 basic medicine
Siderophore lcsh:QH426-470 030106 microbiology Genome Rhizosphere of bait plant Short Genome Report 03 medical and health sciences Botany Genetics Gene Stress protection Whole genome sequencing Rhizosphere biology Strain (biology) Biocontrol biology.organism_classification Pseudomonas corrugata Detoxification systems lcsh:Genetics 030104 developmental biology Plant growth promotion Sphagnum magellanicum-treated seeds Bacteria |
| Zdroj: | Standards in Genomic Sciences Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-7 (2017) |
| ISSN: | 1944-3277 |
| Popis: | Pseudomonas corrugata strain RM1-1-4 is a rhizosphere colonizer of oilseed rape. A previous study has shown that this motile, Gram-negative, non-sporulating bacterium is an effective stress protecting and biocontrol agent, which protects their hosts against abiotic and biotic stresses. Here, we announce and describe the complete genome sequence of P. corrugata RM1-1-4 consisting of a single 6.1 Mb circular chromosome that encodes 5189 protein coding genes and 85 RNA-only encoding genes. Genome analysis revealed genes predicting functions such as detoxifying mechanisms, stress inhibitors, exoproteases, lipoproteins or volatile components as well as rhizobactin siderophores and spermidine. Further analysis of its genome will help to identify traits promising for stress protection, biocontrol and plant growth promotion properties. |
| Databáze: | OpenAIRE |
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