A conserved interdomain interaction is a determinant of folding cooperativity in the GST fold
| Autor: | Sylvia Fanucchi, Manuel A. Fernandes, Stoyan Stoychev, Heini W. Dirr, Ikechukwu Achilonu, Nishal Parbhoo, Roslin J. Adamson, Samantha Gildenhuys |
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| Rok vydání: | 2011 |
| Předmět: |
Alanine
Circular dichroism Protein Folding Binding Sites Base Sequence Chemistry Protein Conformation Circular Dichroism Mutant Cooperativity Crystallography X-Ray Biochemistry Conserved sequence Crystallography Protein structure Biophysics Mutagenesis Site-Directed Protein folding Spectrophotometry Ultraviolet Binding site Conserved Sequence DNA Primers Glutathione Transferase |
| Zdroj: | Biochemistry. 50(32) |
| ISSN: | 1520-4995 |
| Popis: | The canonical glutathione transferase (GST) fold found in many monomeric and dimeric proteins consists of two domains that differ in structure and conformational dynamics. However, no evidence exists that the two domains unfold/fold independently at equilibrium, indicating the significance of interdomain interactions in governing cooperativity between domains. Bioinformatics analyses indicate the interdomain interface of the GST fold is large, predominantly hydrophobic with a high packing density explaining cooperative interdomain behavior. Structural alignments reveal a topologically conserved lock-and-key interaction across the domain interface in which a bulky hydrophobic residue ("key") protrudes from the surface of the N-domain and inserts into a pocket ("lock") in the C-domain. To better understand the molecular basis for the contribution of interdomain interactions toward cooperativity within the GST fold in the absence of any influence from quaternary interactions, studies were done with two monomeric GST proteins: Escherichia coli Grx2 (EcGrx2) and human CLIC1 (hCLIC1). Replacing the methionine "key" residue with alanine is structurally nondisruptive, whereas it significantly diminishes the folding cooperativity of both proteins. The loss in cooperativity between domains in the mutants is reflected by a change in the equilibrium folding mechanism from a wild-type two-state process to a three-state process, populating a stable folding intermediate. |
| Databáze: | OpenAIRE |
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