The complete chloroplast genome sequence of medicinal fern Polypodiodes niponica (Polypodiaceae)
| Autor: | Haoyun Xiao, Minghui Zhang, Zhen Wang, Shanshan Liu, Yingjuan Su, Shufeng Li, Ting Wang |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2018 |
| Předmět: |
0106 biological sciences
0301 basic medicine Whole genome sequencing Genetics biology Phylogenetic tree Inverted repeat phylogenetic analysis Ribosomal RNA biology.organism_classification 010603 evolutionary biology 01 natural sciences Genome 03 medical and health sciences 030104 developmental biology Polypodiaceae medicinal fern chloroplast genome Molecular Biology Gene GC-content Mitogenome Announcement Polypodiodes niponica Research Article |
| Zdroj: | Mitochondrial DNA. Part B, Resources article-version (VoR) Version of Record |
| ISSN: | 2380-2359 |
| Popis: | The complete chloroplast genome of Polypodiodes niponica has been determined. It is a double stranded circular DNA of 152,551 bp length, containing two inverted repeat (IR, 24,643 bp each) regions, separated by large single-copy (LSC, 81,506 bp) and small single-copy (SSC, 21,759 bp) regions, respectively. The genome contains 131 genes, including 88 protein-coding genes, 35 tRNA genes, and eight rRNA genes. The total GC content of the chloroplast genome is 42.4%. ML phylogenetic analysis revealed that P. niponica was most closely related to Lepisorus clathratus. |
| Databáze: | OpenAIRE |
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