Additional file 9: of Convergence in LINE-1 nucleotide variations can benefit redundantly forming triplexes with lncRNA in mammalian X-chromosome inactivation

Autor: Matsuno, Yoko, Yamashita, Takefumi, Wagatsuma, Michiru, Yamakage, Hajime
Rok vydání: 2019
DOI: 10.6084/m9.figshare.9178571.v1
Popis: Whole alignments of r-AG motif sequences in the paired L1s of the three species. Only the first and last parts of the alignments of human paired L1PA5 and L1PA8 are depicted in Fig. 7c. The paired L1Md_T (mouse) and L1_Mdo4 (mouse) with moderate-to-high sequence identities (91 and 89%, respectively) are also shown. In contrast to colored motifs, non-colored motifs reflect variations in nucleotides. A rectangular line surrounding an entire or part of an alignment indicates an area that was analyzed for sequence identities by BLAST. For example, positions 740â 6,118 for (A) and 717â 6,117 for (B) of L1Md_T indicate areas analyzed by a BLAST search. (PDF 712 kb)
Databáze: OpenAIRE