Additional file 3 of ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell

Autor: Leung, Amy Wing-Sze, Leung, Henry Chi-Ming, Wong, Chak-Lim, Zheng, Zhen-Xian, Lui, Wui-Wang, Luk, Ho-Ming, Lo, Ivan Fai-Man, Luo, Ruibang, Lam, Tak-Wah
Rok vydání: 2022
DOI: 10.6084/m9.figshare.19311380
Popis: Additional file 3: The comparison in depth of coverage (DoC) between medical exome sequencing using ECNano ONT protocol and NGS Illumina NextSeq 500. The NGS data was obtained from a published sequencing run by Pengelly et al., 2020. For a fair comparison, random downsampling of the NGS reads was performed so that both runs have approximately 10Gbp total throughput. (B) Example depth distribution comparison of target regions in three captured genes: (i.e. AGRN, BRCA and NF1) between ECNano ONT (upper tracks) and NGS (lower tracks) sequencing using HG001 standard DNA samples.
Databáze: OpenAIRE