| Autor: |
Garc��a-Mart��n, Ana Bel��n, Roder, Thomas, Schmitt, Sarah, Zeeh, Friederike, Bruggmann, R��my, Perreten, Vincent |
| Rok vydání: |
2022 |
| DOI: |
10.6084/m9.figshare.19220620.v1 |
| Popis: |
Additional file 10: Figure S3. Pangenome analysis of genomes of different Brachyspira species. (A) General organization and visualization of 90 Brachyspira genomes based on the presence/absence of genes and their contribution to the bins core, soft-core and singleton. Total number of gene clusters (GCs) as well as the number of gene calls falling into each bin are shown in brackets. A graph bar displaying the number of singletons per genome, varying from 0 to 174, is also included.The two outmost layers represent both functional annotations derived from the NCBI-PGAP and COGs database. Known and unknown functions are in dark and light blue, respectively. Total number of both known and unknown functions are indicated in brackets. Genomes are colored-coded according to the seven different species they belong to except Swiss B. hyodysenteriae genomes that are colored in orange to facilitate their visualization. (B) Visualization of the soft-core gene clusters containing a high number of accessory genes. (C) Singletons present in each genome are highlighted and information regarding functional annotation is indicated in brackets. |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
|
