Frateuria defendens sp. nov., bacterium isolated from the yellows grapevine’s disease vector Hyalesthes obsoletus
| Autor: | Vered Naor, Diego Santos-Garcia, Einat Zchori-Fein, Lilach Iasur-Kruh, Netta Mozes-Daube, Ofir Lidor, Ofir Bahar, Eyal Cohen |
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| Přispěvatelé: | Department of Entomology, The Hebrew University of Jerusalem, Rehovot, Israel |
| Jazyk: | angličtina |
| Rok vydání: | 2019 |
| Předmět: |
DNA
Bacterial 0106 biological sciences 0301 basic medicine Ubiquinone [SDV]Life Sciences [q-bio] Frateuria aurantia Disease Vectors 010603 evolutionary biology 01 natural sciences Microbiology Hemiptera 03 medical and health sciences chemistry.chemical_compound Phylogenetics RNA Ribosomal 16S Animals Israel Gene Phylogeny Ecology Evolution Behavior and Systematics Base Composition biology Strain (chemistry) Phylogenetic tree Pigmentation Fatty Acids Nucleic Acid Hybridization Sequence Analysis DNA General Medicine biology.organism_classification 16S ribosomal RNA Bacterial Typing Techniques 030104 developmental biology chemistry Pseudomonadaceae Bacteria Nutrient agar |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2019, 69 (5), pp.1281-1287. ⟨10.1099/ijsem.0.003305⟩ |
| ISSN: | 1466-5026 1466-5034 |
| DOI: | 10.1099/ijsem.0.003305⟩ |
| Popis: | A Dyella -like bacterium was previously isolated from the planthopper Hyalesthes obsoletus (Hemiptera). Based on its 16S rRNA gene sequence, strain DHoT was assigned to the family Rhodanobacteraceae with Dyella and Frateuria as its closest relatives. The closest 16S rRNA gene sequences were Frateuria aurantia DSM 6220T (98.2 %), Dyella thiooxydans ATSB10T (98 %), Dyella terrae JS14-6T (97.8 %) and Dyella marensis CS5-B2T (97.8 %). Strain DHoT is a Gram-negative, aerobic, motile, yellow-pigmented, rod-shaped bacterium. Strain DHoT cells grew well at 28–30 °C and at pH 6.5–7.5 on a nutrient agar plate. DNA–DNA hybridization showed that the relatedness between strain DHoT and D. jiangningensis strain SBZ3-12T, and F. aurantia DSM 6220T was 42.7 and 42.6 %, respectively. Ubiquinone Q-8 was the predominant respiratory quinone, and the major fatty acids (>10 %) were iso-C15 : 0, iso-C16 : 0 and iso-C17 : 0. In silico analysis based on phylogenetics and sequence identity at the nucleotide and protein levels suggests that Frateuria is the closest known relative of strain DHoT. Based on the phenotypic, chemotaxonomic and phylogenetic data, strain DHoT was designated as a novel species of the genus Frateuria , for which the name Frateuria defendens sp. nov. is proposed. The type strain is DHoT (=NCCB 100648T; =DLBT=DSM 106169T). |
| Databáze: | OpenAIRE |
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