Additional file 4 of Reliable assessment of telomere maintenance mechanisms in neuroblastoma

Autor: Meeser, Alina, Bartenhagen, Christoph, Werr, Lisa, Hellmann, Anna-Maria, Kahlert, Yvonne, Hemstedt, Nadine, Nürnberg, Peter, Altmüller, Janine, Ackermann, Sandra, Hero, Barbara, Simon, Thorsten, Peifer, Martin, Fischer, Matthias, Rosswog, Carolina
Rok vydání: 2022
DOI: 10.6084/m9.figshare.21203259.v1
Popis: Additional file 4: Figure S1. TERT expression and telomerase activity in neuroblastoma with activated telomere maintenance mechanism. (A) Distribution of TERT log2 expression values, determined by RNA sequencing, in neuroblastomas harboring TERT rearrangements, and/or MNA or none of these alterations. The threshold at 7.58 was defined as the lowest expression value having a posterior probability ≥95% to fall within the distribution on the right (i.e., the group of tumors with TERT/MYCN alteration). (B) Log2 TERT mRNA expression levels, dependent on telomere maintenance subgroup. ANOVA, Tukey’s multiple comparison test. n=55, RNA sequencing data was available for 64 cases, however ambiguous cases (n=7) as well as cases that show MNA and TERT RA in the same tumor (n=3) were excluded (see also Fig. 1B). Whiskers are limited to 1.5x interquartile range. (C) Relative telomerase activity dependent on underlying alteration, determined by TRAP assay. Unpaired t-test. n=15. Whiskers are limited to 1.5x interquartile range.
Databáze: OpenAIRE