Genome-wide identification of the maize 2OGD superfamily genes and their response to Fusarium verticillioides and Fusarium graminearum
| Autor: | Changxiao Tang, Guan-Feng Wang, Yu-Xiu Zhu, Chunxia Ge |
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| Rok vydání: | 2021 |
| Předmět: |
0301 basic medicine
Fusarium Coenzymes Zea mays Genome Chromosomes Plant Dioxygenases Evolution Molecular 03 medical and health sciences chemistry.chemical_compound 0302 clinical medicine Gene Expression Regulation Plant Genetics RNA-Seq Promoter Regions Genetic Mycotoxin Gene Transcription factor Conserved Sequence Phylogeny Disease Resistance Plant Diseases Plant Proteins Binding Sites Base Sequence Plant Stems biology Phylogenetic tree Gene Expression Regulation Developmental food and beverages Promoter General Medicine biology.organism_classification 030104 developmental biology Flavonoid biosynthesis chemistry 030220 oncology & carcinogenesis Ketoglutaric Acids Genome-Wide Association Study Transcription Factors |
| Zdroj: | Gene. 764:145078 |
| ISSN: | 0378-1119 |
| Popis: | In maize, eat rot and stalk rot caused by Fusarium verticillioides and Fusarium graminearum lead to contamination of moldy grains to produce mycotoxins. Identification of resistance genes against these pathogens for maize breeding is an effective way for disease control. Several 2-oxoglutarate-dependent dioxygenase (2OGD) proteins have been found to confer resistance to different pathogens in diverse plant species. However, little is known about the 2OGD superfamily in maize. Here, we identified 103 putative 2OGD genes in maize from a genome-wide analysis, and divided them into three classes - DOXA, DOXB, and DOXC. We further comprehensively investigated their gene structure, chromosome distribution, phylogenetic tree, gene-function enrichment, and expression profiles among different tissues. The genes encoding three 2OGD proteins, ACO, F3H, and NCS involved in ethylene biosynthesis, flavonoids biosynthesis, and alkaloids biosynthesis pathways, respectively, were identified to be induced by F. verticillioides and F. graminearum. The promoters of the three genes contain the binding sites for the transcription factor ZmDOF and ZmHSF, which are also induced by the two pathogens. The results imply that the three 2OGDs and the two transcription factors might be involved in the resistance to the two pathogens. This study provided a comprehensive understanding of the 2OGD superfamily in maize and laid the foundation for the further functional analysis of their roles in maize resistance to eat rot and stalk rot. |
| Databáze: | OpenAIRE |
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