Alternative splicing regulates stochastic NLRP3 activity

Autor: Gerald Seifert, Florian Hoss, Stefan Canzar, Juan F. Rodriguez-Alcazar, Matthias Geyer, Francisca Rojas Ringeling, Hal M. Hoffman, Rainer Stahl, Christopher D. Putnam, James L. Mueller, Lori Broderick, Eicke Latz, Richard D. Kolodner, Rebecca Brinkschulte
Jazyk: angličtina
Rok vydání: 2019
Předmět:
0301 basic medicine
RNA splicing
Swine
Inflammasomes
metabolism [NLR Family
Pyrin Domain-Containing 3 Protein]

LRPPRC protein
human

General Physics and Astronomy
02 engineering and technology
Inflammasome
Exon
NOD-like receptors
metabolism [NIMA-Related Kinases]
Innate
Protein Isoforms
NIMA-Related Kinases
genetics [Inflammasomes]
lcsh:Science
chemistry [Inflammasomes]
Cells
Cultured

Innate immunity
Cultured
Multidisciplinary
integumentary system
Exons
genetics [Exons]
021001 nanoscience & nanotechnology
Neoplasm Proteins
metabolism [Neoplasm Proteins]
ddc:500
0210 nano-technology
medicine.drug
genetics [Protein Isoforms]
1.1 Normal biological development and functioning
Science
Cells
chemistry [Neoplasm Proteins]
Protein domain
chemical and pharmacologic phenomena
Computational biology
genetics [NIMA-Related Kinases]
NLR Family
Biology
General Biochemistry
Genetics and Molecular Biology

Article
03 medical and health sciences
Protein Domains
Underpinning research
chemistry [Protein Isoforms]
NLR Family
Pyrin Domain-Containing 3 Protein

Genetics
medicine
NLRP3 protein
human

Gene family
Animals
Humans
Amino Acid Sequence
metabolism [Protein Isoforms]
genetics [NLR Family
Pyrin Domain-Containing 3 Protein]

Stochastic Processes
genetics [Neoplasm Proteins]
Macrophages
fungi
HEK 293 cells
Alternative splicing
Immunity
chemistry [NLR Family
Pyrin Domain-Containing 3 Protein]

General Chemistry
Pyrin Domain-Containing 3 Protein
Immunity
Innate

genetics [Immunity
Innate]

Alternative Splicing
030104 developmental biology
HEK293 Cells
metabolism [Macrophages]
lcsh:Q
NEK7 protein
human

metabolism [Inflammasomes]
Function (biology)
Zdroj: Nature Communications 10(1), 3238 (2019). doi:10.1038/s41467-019-11076-1
Nature Communications
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
Nature communications, vol 10, iss 1
Popis: Leucine-rich repeat (LRR) domains are evolutionarily conserved in proteins that function in development and immunity. Here we report strict exonic modularity of LRR domains of several human gene families, which is a precondition for alternative splicing (AS). We provide evidence for AS of LRR domain within several Nod-like receptors, most prominently the inflammasome sensor NLRP3. Human NLRP3, but not mouse NLRP3, is expressed as two major isoforms, the full-length variant and a variant lacking exon 5. Moreover, NLRP3 AS is stochastically regulated, with NLRP3 ∆ exon 5 lacking the interaction surface for NEK7 and hence loss of activity. Our data thus reveals unexpected regulatory roles of AS through differential utilization of LRRs modules in vertebrate innate immunity.
Leucine-rich repeat (LRR) domains are commonly present in immune regulatory proteins. Here the authors show that LRR exonic modularity and alternative splicing of an LRR-containing protein, NLRP3, modulate the ratio of functional/afunctional NLRP3 isoforms to instill a stochastic regulation of NLRP3-mediated inflammation and innate immunity.
Databáze: OpenAIRE