Genome-Wide Identification and Characterization of Long Noncoding RNAs Involved in Chinese Wheat Mosaic Virus Infection of Nicotiana benthamiana
| Autor: | Weiran Zheng, Hai-chao Hu, Peng Jin, Qisen Lu, Jian Yang, Linna Cai, Liangying Dai, Cailin Hu, Jianping Chen |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2021 |
| Předmět: |
0106 biological sciences
0301 basic medicine viruses RNA-sequencing Nicotiana benthamiana 01 natural sciences Genome General Biochemistry Genetics and Molecular Biology 03 medical and health sciences Plant virus Chinese wheat mosaic virus microRNA lcsh:QH301-705.5 Genetics General Immunology and Microbiology biology long non-coding RNA fungi RNA food and beverages biology.organism_classification Long non-coding RNA microRNA target 030104 developmental biology lcsh:Biology (General) Identification (biology) General Agricultural and Biological Sciences 010606 plant biology & botany |
| Zdroj: | Biology Volume 10 Issue 3 Biology, Vol 10, Iss 232, p 232 (2021) |
| ISSN: | 2079-7737 |
| DOI: | 10.3390/biology10030232 |
| Popis: | Recent studies have shown that a large number of long noncoding RNAs (lncRNAs) can regulate various biological processes in animals and plants. Although lncRNAs have been identified in many plants, they have not been reported in the model plant Nicotiana benthamiana. Particularly, the role of lncRNAs in plant virus infection remains unknown. In this study, we identified lncRNAs in N. benthamiana response to Chinese wheat mosaic virus (CWMV) infection by RNA sequencing. A total of 1175 lncRNAs, including 65 differentially expressed lncRNAs, were identified during CWMV infection. We then analyzed the functions of some of these differentially expressed lncRNAs. Interestingly, one differentially expressed lncRNA, XLOC_006393, was found to participate in CWMV infection as a precursor to microRNAs in N. benthamiana. These results suggest that lncRNAs play an important role in the regulatory network of N. benthamiana in response to CWMV infection. |
| Databáze: | OpenAIRE |
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