Additional file 6 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

Autor: Escudero Castelán, Nayeli, Semmens, Dean C., Guerra, Luis Alfonso Yañez, Zandawala, Meet, dos Reis, Mario, Slade, Susan E., Scrivens, James H., Zampronio, Cleidiane G., Jones, Alexandra M., Mirabeau, Olivier, Elphick, Maurice R.
Rok vydání: 2022
DOI: 10.6084/m9.figshare.20625004
Popis: Additional file 6. Phylogenetic analysis of bilaterian kisspeptin-type receptors, including expanded receptor families in the starfish A. rubens (ArubKPR1-11) and other echinoderms. The phylogenetic tree was constructed using the Bayesian method, WAG+G4 amino-acid substitution model, and rooted with galanin/allatostatin-A-type receptors as an outgroup. Probabilities for nodes are stated according to SH-aLRT/UFBoot methods. The scale bar indicates amino acid substitutions per site. Species names are as follows: Ajap, Apostichopus japonicus; Arub, Asterias rubens, Anjap Annessia japonica; Bflo, Branchiostoma floridae; Cgig, Crassostrea gigas; Hsap, Homo sapines; Locu, Lepisosteus oculatus; Pdum, Platynereis dumerilii; Skow, Saccoglossus kowalevskii; Spur, Strongylocentrotus purpuratus; Xtro Xenopus tropicalis. Accession numbers for the sequences of the receptors included in this tree are listed in additional file 3.
Databáze: OpenAIRE