An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress

Autor: Marie Mirouze, Hidetaka Ito, Hervé Gaubert, Etienne Bucher, Jerzy Paszkowski, Isabelle Vaillant
Jazyk: angličtina
Rok vydání: 2011
Předmět:
0106 biological sciences
Small interfering RNA
STRESS
Transcription
Genetic

Mutant
Arabidopsis
Retrotransposon
01 natural sciences
Gene Expression Regulation
Plant

Gene Regulatory Networks
RNA
Small Interfering

TEMPERATURE
MUTATION
Genetics
Regulation of gene expression
DNA
Plant/genetics

RNA
Small Interfering/genetics

METHODE D'ANALYSE
0303 health sciences
Multidisciplinary
Seedling/genetics
ARN
Arabidopsis Proteins/genetics
ddc:580
RNA
Plant

REGULATION
Retroelements/genetics
DNA
Plant

Retroelements
Heat-Shock Response/genetics
PLANTE
Biology
Genes
Plant

Chromosomes
Plant

Genes
Plant/genetics

03 medical and health sciences
Extrachromosomal DNA
Gene Expression Regulation
Plant/genetics

Epigenetics
RETROTRANSPOSON
Gene
030304 developmental biology
Transcription
Genetic/genetics

Models
Genetic

Arabidopsis Proteins
BIOLOGIE MOLECULAIRE
biology.organism_classification
GENE
Arabidopsis/genetics/growth & development/physiology
Mutagenesis
Insertional

Seedlings
Mutagenesis
Insertional/genetics

Heat-Shock Response
010606 plant biology & botany
Gene Regulatory Networks/genetics
RNA
Plant/genetics
Zdroj: Nature, Vol. 472, No 7341 (2011) pp. 115-119
Nature
ISSN: 0028-0836
Popis: Eukaryotic genomes consist to a significant extent of retrotransposons that are suppressed by host epigenetic mechanisms, preventing their uncontrolled propagation. However, it is not clear how this is achieved. Here we show that in Arabidopsis seedlings subjected to heat stress, a copia-type retrotransposon named ONSEN (Japanese 'hot spring') not only became transcriptionally active but also synthesized extrachromosomal DNA copies. Heat-induced ONSEN accumulation was stimulated in mutants impaired in the biogenesis of small interfering RNAs (siRNAs); however, there was no evidence of transposition occurring in vegetative tissues. After stress, both ONSEN transcripts and extrachromosomal DNA gradually decayed and were no longer detected after 20-30 days. Surprisingly, a high frequency of new ONSEN insertions was observed in the progeny of stressed plants deficient in siRNAs. Insertion patterns revealed that this transgenerational retrotransposition occurred during flower development and before gametogenesis. Therefore in plants with compromised siRNA biogenesis, memory of stress was maintained throughout development, priming ONSEN to transpose during differentiation of generative organs. Retrotransposition was not observed in the progeny of wild-type plants subjected to stress or in non-stressed mutant controls, pointing to a crucial role of the siRNA pathway in restricting retrotransposition triggered by environmental stress. Finally, we found that natural and experimentally induced variants in ONSEN insertions confer heat responsiveness to nearby genes, and therefore mobility bursts may generate novel, stress-responsive regulatory gene networks.
Databáze: OpenAIRE