Altered Virome and Bacterial Microbiome in Human Immunodeficiency Virus-Associated Acquired Immunodeficiency Syndrome

Autor: Jesus-Mario Luevano, Meaghan Flagg, Brian C. Keller, David B. Gootenberg, Yap Boum, Cynthia L. Monaco, Jeffrey N. Martin, Herbert W. Virgin, Craig B. Wilen, David R. Bangsberg, Guoyan Zhao, Alexander Lankowski, Douglas S. Kwon, Mark J. Siedner, Peter W. Hunt, Megan T. Baldridge, Scott A. Handley, David Wang, Efrem S. Lim, Musie Ghebremichael, Jason M. Norman
Rok vydání: 2015
Předmět:
0301 basic medicine
CD4-Positive T-Lymphocytes
Cancer Research
microbiome
2.1 Biological and endogenous factors
2.2 Factors relating to the physical environment
Enteropathy
Uganda
Aetiology
Immunodeficiency
Phylogeny
systemic inflammation
virome
Microbiota
Gastrointestinal Microbiome
HIV Enteropathy
adenovirus
Enterobacteriaceae
Healthy Volunteers
AIDS
Infectious Diseases
Anti-Retroviral Agents
Medical Microbiology
Viruses
HIV/AIDS
Infection
Immunology
030106 microbiology
Biology
Microbiology
Article
03 medical and health sciences
Acquired immunodeficiency syndrome (AIDS)
Clinical Research
Immunology and Microbiology(all)
Virology
Genetics
medicine
Humans
Human virome
Microbiome
Molecular Biology
Acquired Immunodeficiency Syndrome
Bacteria
Human Genome
HIV
Genetic Variation
AIDS enteropathy
medicine.disease
biology.organism_classification
Good Health and Well Being
030104 developmental biology
Parasitology
Digestive Diseases
Zdroj: Cell host & microbe, vol 19, iss 3
ISSN: 1934-6069
Popis: Human immunodeficiency virus (HIV) infection is associated with increased intestinal translocation of microbial products and enteropathy as well as alterations in gut bacterial communities. However, whether the enteric virome contributes to this infection and resulting immunodeficiency remains unknown. We characterized the enteric virome and bacterial microbiome in a cohort of Ugandan patients, including HIV-uninfected or HIV-infected subjects and those either treated with anti-retroviral therapy (ART) or untreated. Low peripheral CD4 T cell counts were associated with an expansion of enteric adenovirus sequences and this increase was independent of ART treatment. Additionally, the enteric bacterial microbiome of patients with lower CD4 T counts exhibited reduced phylogenetic diversity and richness with specific bacteria showing differential abundance, including increases in Enterobacteriaceae, which have been associated with inflammation. Thus, immunodeficiency in progressive HIV infection is associated with alterations in the enteric virome and bacterial microbiome, which may contribute to AIDS-associated enteropathy and disease progression.
Databáze: OpenAIRE