Parapedobacter soli sp. nov., isolated from soil of a ginseng field
| Autor: | Myung Kyum Kim, Tae-Hoo Yi, Deok-Chun Yang, Yu-Jin Kim, Se-Young Kim, Youngae Kim, Nak-Kyun Soung |
|---|---|
| Rok vydání: | 2008 |
| Předmět: |
food.ingredient
Molecular Sequence Data Panax Biology medicine.disease_cause Microbiology Parapedobacter koreensis Parapedobacter Ginseng food Species Specificity RNA Ribosomal 16S Botany medicine Soil Microbiology Ecology Evolution Behavior and Systematics Parapedobacter soli Bacteroidetes Fatty Acids Genes rRNA Sequence Analysis DNA General Medicine biology.organism_classification 16S ribosomal RNA Bacterial Typing Techniques Phenotype Family Sphingobacteriaceae Gene sequence Bacteria |
| Zdroj: | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 58:337-340 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/ijs.0.65249-0 |
| Popis: | Strain DCY14(T), a Gram-negative, non-spore-forming, rod-shaped, non-motile bacterium, was isolated from soil from a ginseng field in Korea and was characterized in order to determine its taxonomic position. 16S rRNA gene sequence analysis revealed that strain DCY14(T) belongs to the family Sphingobacteriaceae, the highest degree of sequence similarity being found with respect to Parapedobacter koreensis Jip14(T) (95.8 %). Chemotaxonomic data revealed that strain DCY14(T) possesses MK-7 as the major menaquinone. The major fatty acids present were anteiso-C(13 : 0), iso-C(15 : 0), iso-C(17 : 0) 3-OH and summed feature 4 (C(16 : 1)omega7c/iso-C(15 : 0) 2-OH). The results of physiological and biochemical tests clearly demonstrated that strain DCY14(T) represents a distinct species. On the basis of these data, DCY14(T) represents a novel species of the genus Parapedobacter, for which the name Parapedobacter soli sp. nov. is proposed. The type strain is DCY14(T) (=KCTC 12984(T) =LMG 24069(T)). |
| Databáze: | OpenAIRE |
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