Development of Small-Molecule PUMA Inhibitors for Mitigating Radiation-Induced Cell Death

Autor: Gabriela Mustata, Ahmet Bakan, Mei Li, Michael W. Epperly, Ivet Bahar, Lin Zhang, Joel S. Greenberger, Nicki Zevola, Jian Yu
Rok vydání: 2011
Předmět:
Cyclin-Dependent Kinase Inhibitor p21
Models
Molecular

Programmed cell death
Databases
Factual

In silico
Molecular Sequence Data
bcl-X Protein
Apoptosis
Radiation-Protective Agents
Plasma protein binding
Molecular Dynamics Simulation
Biology
Transfection
Article
Mice
Cell Line
Tumor

Proto-Oncogene Proteins
hemic and lymphatic diseases
Puma
Drug Discovery
Animals
Humans
Protein Interaction Domains and Motifs
p53 upregulated modulator of apoptosis
Amino Acid Sequence
Cell-Free System
Molecular Structure
General Medicine
Lymphoid Progenitor Cells
HCT116 Cells
biology.organism_classification
Molecular biology
Small molecule
Cell biology
Germ Cells
Proto-Oncogene Proteins c-bcl-2
Drug Design
biology.protein
Myeloid Cell Leukemia Sequence 1 Protein
biological phenomena
cell phenomena
and immunity

Pharmacophore
Apoptosis Regulatory Proteins
Protein Binding
Zdroj: Current Topics in Medicinal Chemistry. 11:281-290
ISSN: 1568-0266
Popis: PUMA (p53 upregulated modulator of apoptosis) is a Bcl-2 homology 3 (BH3)-only Bcl-2 family member and a key mediator of apoptosis induced by a wide variety of stimuli. PUMA is particularly important in initiating radiation-induced apoptosis and damage in the gastrointestinal and hematopoietic systems. Unlike most BH3-only proteins, PUMA neutralizes all five known antiapoptotic Bcl-2 members through high affinity interactions with its BH3 domain to initiate mitochondria-dependent cell death. Using structural data on the conserved interactions of PUMA with Bcl-2-like proteins, we developed a pharmacophore model that mimics these interactions. In silico screening of the ZINC 8.0 database with this pharmacophore model yielded 142 compounds that could potentially disrupt these interactions. Thirteen structurally diverse compounds with favorable in silico ADME/Toxicity profiles have been retrieved from this set. Extensive testing of these compounds using cell-based and cell-free systems identified lead compounds that confer considerable protection against PUMA-dependent and radiation-induced apoptosis, and inhibit the interaction between PUMA and Bcl-xL.
Databáze: OpenAIRE